RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 RRP12Q5JTH9 1297 aaKnown RBP12.47□□□□□ -0.41
COPS6-208ENST00000474823 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
COPS6-208ENST00000474823 SH2D4AQ9H788 454 aa12.47□□□□□ -0.41
COPS6-208ENST00000474823 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
COPS6-208ENST00000474823 RNF186Q9NXI6 227 aa12.47□□□□□ -0.41
COPS6-208ENST00000474823 SAGE1Q9NXZ1 904 aa12.47□□□□□ -0.41
COPS6-208ENST00000474823 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
COPS6-208ENST00000474823 BTBD19C9JJ37 291 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 IGF2BP3O00425 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
COPS6-208ENST00000474823 ORC4O43929 436 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 HMGCS2P54868 508 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 TFAP4Q01664 338 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 ATP2B2Q01814 1243 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 USP17L2Q6R6M4 530 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 ANKRD23Q86SG2 305 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
COPS6-208ENST00000474823 STAG1Q8WVM7 1258 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 PTPN18Q99952 460 aa12.46□□□□□ -0.41
COPS6-208ENST00000474823 ZCCHC17Q9NP64 241 aaKnown RBP12.46□□□□□ -0.41
COPS6-208ENST00000474823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
COPS6-208ENST00000474823 FGRP09769 529 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 NT5C2P49902 561 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 TRDNQ13061 729 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.426e-7■■□□□ 12
COPS6-208ENST00000474823 TAF1CQ15572 869 aaPredicted RBP12.45□□□□□ -0.42
COPS6-208ENST00000474823 ZYXQ15942 572 aaKnown RBP12.45□□□□□ -0.42
COPS6-208ENST00000474823 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 TBC1D10CQ8IV04 446 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 FAM43AQ8N2R8 423 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 ESR2Q92731 530 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 LSG1Q9H089 658 aaKnown RBP12.45□□□□□ -0.42
COPS6-208ENST00000474823 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 INCENPQ9NQS7 918 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 AGTPBP1Q9UPW5 1226 aa12.45□□□□□ -0.42
COPS6-208ENST00000474823 RBM8AQ9Y5S9 174 aaKnown RBP12.45□□□□□ -0.42
COPS6-208ENST00000474823 PHIPQ8WWQ0 1821 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 PDHXO00330 501 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 REC8O95072 547 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 EEF2P13639 858 aaKnown RBP12.44□□□□□ -0.42
COPS6-208ENST00000474823 CTCFP49711 727 aaPredicted RBP12.44□□□□□ -0.42
COPS6-208ENST00000474823 RNF20Q5VTR2 975 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 CLEC10AQ8IUN9 316 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 PARK7Q99497 189 aaKnown RBP12.44□□□□□ -0.42
COPS6-208ENST00000474823 KRT23Q9C075 422 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
COPS6-208ENST00000474823 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 FOXN1O15353 648 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 RAD21O60216 631 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 TTLL1O95922 423 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 CYP21A2P08686 494 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 OSBPP22059 807 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 MOGSQ13724 837 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.43□□□□□ -0.42
COPS6-208ENST00000474823 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 MTMR4Q9NYA4 1195 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 NYAP2Q9P242 653 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 TSKSQ9UJT2 592 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 TMX2Q9Y320 296 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
COPS6-208ENST00000474823 NEDD4P46934 1319 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 IGKV6D-41A0A0C4DH26 115 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
COPS6-208ENST00000474823 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
COPS6-208ENST00000474823 CRHR2Q13324 411 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 DGKZQ13574 1117 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 TREML2Q5T2D2 321 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 GPAT2Q6NUI2 795 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
COPS6-208ENST00000474823 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
COPS6-208ENST00000474823 LPAR1Q92633 364 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 C12orf42Q96LP6 360 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
COPS6-208ENST00000474823 LAMA4Q16363 1823 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 PTPRFP10586 1907 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 B4E1Z4 1266 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 KDM4AO75164 1064 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
COPS6-208ENST00000474823 VCAM1P19320 739 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
COPS6-208ENST00000474823 TCP11L1Q9NUJ3 509 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms