RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
APTX-217ENST00000473221 SIPA1L1O43166 1804 aa11.78□□□□□ -0.52
APTX-217ENST00000473221 LMNB1P20700 586 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 CDC27P30260 824 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 RASSF7Q02833 373 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 ARHGAP27Q6ZUM4 889 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 FAM83AQ86UY5 434 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 FAM151AQ8WW52 585 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
APTX-217ENST00000473221 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 ORC3Q9UBD5 711 aaPredicted RBP11.77□□□□□ -0.53
APTX-217ENST00000473221 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
APTX-217ENST00000473221 MYH6P13533 1939 aa11.77□□□□□ -0.53
APTX-217ENST00000473221 GREB1LQ9C091 1923 aaPredicted RBP11.77□□□□□ -0.53
APTX-217ENST00000473221 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
APTX-217ENST00000473221 H3BQV1 296 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 CAPN15O75808 1086 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
APTX-217ENST00000473221 SSRP1Q08945 709 aaKnown RBP11.76□□□□□ -0.53
APTX-217ENST00000473221 TATDN1Q6P1N9 297 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 ZFPM1Q8IX07 1006 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 TRIM22Q8IYM9 498 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
APTX-217ENST00000473221 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 RNF26Q9BY78 433 aaPredicted RBP11.76□□□□□ -0.53
APTX-217ENST00000473221 MYOZ2Q9NPC6 264 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 NMRK2Q9NPI5 230 aa11.76□□□□□ -0.53
APTX-217ENST00000473221 WDR90Q96KV7 1748 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 DDTLA6NHG4 134 aaPredicted RBP11.75□□□□□ -0.53
APTX-217ENST00000473221 DEXIO95424 95 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 TOP1P11387 765 aaKnown RBP11.75□□□□□ -0.53
APTX-217ENST00000473221 RXRAP19793 462 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 KIF5BP33176 963 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 SHMT1P34896 483 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 TNNI2P48788 182 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 GNAQP50148 359 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 TCP10Q12799 353 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 NBR1Q14596 966 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 SKOR2Q2VWA4 1001 aaPredicted RBP11.75□□□□□ -0.53
APTX-217ENST00000473221 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
APTX-217ENST00000473221 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
APTX-217ENST00000473221 C8orf76Q96K31 380 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 TMEM47Q9BQJ4 181 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 LZTS2Q9BRK4 669 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
APTX-217ENST00000473221 TCHHQ07283 1943 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
APTX-217ENST00000473221 WNT10BO00744 389 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
APTX-217ENST00000473221 TBC1D12O60347 775 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 NMT2O60551 498 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 CACNB3P54284 484 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 CCDC144CPQ8IYA2 1237 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 PNMA1Q8ND90 353 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
APTX-217ENST00000473221 RBM27Q9P2N5 1060 aaKnown RBP11.74□□□□□ -0.53
APTX-217ENST00000473221 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
APTX-217ENST00000473221 STX8Q9UNK0 236 aa11.74□□□□□ -0.53
APTX-217ENST00000473221 H7C1D1 291 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 AKR1B1P15121 316 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 GMPSP49915 693 aaPredicted RBP11.73□□□□□ -0.53
APTX-217ENST00000473221 HTRA3P83110 453 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 AKAP17AQ02040 695 aaKnown RBP11.73□□□□□ -0.53
APTX-217ENST00000473221 FUT2Q10981 343 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 GRM4Q14833 912 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
APTX-217ENST00000473221 ATL3Q6DD88 541 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 MCTP1Q6DN14 999 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 GPC2Q8N158 579 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
APTX-217ENST00000473221 CEP95Q96GE4 821 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 SLC26A6Q9BXS9 759 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 MTMR4Q9NYA4 1195 aa11.73□□□□□ -0.53
APTX-217ENST00000473221 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 CNTNAP1P78357 1384 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
APTX-217ENST00000473221 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 DTNBO60941 627 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 TTLL1O95922 423 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 MAP3K10Q02779 954 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 RESTQ13127 1097 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 TRIM29Q14134 588 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
APTX-217ENST00000473221 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms