RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 MFSD6Q6ZSS7 791 aa24.64■■□□□ 1.54
TOP3A-204ENST00000472959 PROCA1Q8NCQ7 364 aaPredicted RBP24.64■■□□□ 1.54
TOP3A-204ENST00000472959 STAG1Q8WVM7 1258 aa24.64■■□□□ 1.54
TOP3A-204ENST00000472959 LAMB1P07942 1786 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 BTBD19C9JJ37 291 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 TRPA1O75762 1119 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 TSPY3P0CV98 308 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 TSPY8P0CW00 308 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 ICA1Q05084 483 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 NEDD1Q8NHV4 660 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 FEZ1Q99689 392 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.63■■□□□ 1.53
TOP3A-204ENST00000472959 LSG1Q9H089 658 aaKnown RBP24.63■■□□□ 1.53
TOP3A-204ENST00000472959 NBPF3Q9H094 633 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 KIAA1683Q9H0B3 1180 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 TMOD4Q9NZQ9 345 aa24.63■■□□□ 1.53
TOP3A-204ENST00000472959 USP14P54578 494 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 HMGCS2P54868 508 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 TFAP4Q01664 338 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 USP17L2Q6R6M4 530 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 GADL1Q6ZQY3 521 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 TBC1D10CQ8IV04 446 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 FAM43AQ8N2R8 423 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 CFHR5Q9BXR6 569 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 SH2D4AQ9H788 454 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 ARHGEF10LQ9HCE6 1279 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 ANO2Q9NQ90 1003 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 INCENPQ9NQS7 918 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 SLC45A1Q9Y2W3 748 aa24.62■■□□□ 1.53
TOP3A-204ENST00000472959 GPAT2Q6NUI2 795 aa24.61■■□□□ 1.53
TOP3A-204ENST00000472959 ACER1Q8TDN7 264 aa24.61■■□□□ 1.53
TOP3A-204ENST00000472959 TOMM22Q9NS69 142 aa24.61■■□□□ 1.53
TOP3A-204ENST00000472959 TACC3Q9Y6A5 838 aa24.61■■□□□ 1.53
TOP3A-204ENST00000472959 ATAD5Q96QE3 1844 aa24.61■■□□□ 1.53
TOP3A-204ENST00000472959 PLIN4Q96Q06 1357 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 IGKV6D-41A0A0C4DH26 115 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 TSPY2A6NKD2 308 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 RANBP6O60518 1105 aaKnown RBP24.6■■□□□ 1.53
TOP3A-204ENST00000472959 CTCFP49711 727 aaPredicted RBP24.6■■□□□ 1.53
TOP3A-204ENST00000472959 FAM47AQ5JRC9 791 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 PPP4R3BQ5MIZ7 849 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 SIAH1Q8IUQ4 282 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 AGTPBP1Q9UPW5 1226 aa24.6■■□□□ 1.53
TOP3A-204ENST00000472959 RBM8AQ9Y5S9 174 aaKnown RBP24.6■■□□□ 1.53
TOP3A-204ENST00000472959 PHIPQ8WWQ0 1821 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 PDHXO00330 501 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 FOXN1O15353 648 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 EEF2P13639 858 aaKnown RBP24.59■■□□□ 1.53
TOP3A-204ENST00000472959 PABPC4Q13310 644 aaKnown RBP eCLIP24.59■■□□□ 1.53
TOP3A-204ENST00000472959 RRP12Q5JTH9 1297 aaKnown RBP24.59■■□□□ 1.53
TOP3A-204ENST00000472959 C12orf42Q96LP6 360 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 EMILIN3Q9NT22 766 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 NYAP2Q9P242 653 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 TMX2Q9Y320 296 aa24.59■■□□□ 1.53
TOP3A-204ENST00000472959 A0A1W2PRG0 241 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 CLEC10AQ8IUN9 316 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 ESR2Q92731 530 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 CNNM2Q9H8M5 875 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 ZFYVE28Q9HCC9 887 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 MTMR4Q9NYA4 1195 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 GTF3C3Q9Y5Q9 886 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 PCNTO95613 3336 aa24.58■■□□□ 1.53
TOP3A-204ENST00000472959 CYP21A2P08686 494 aa24.57■■□□□ 1.52
TOP3A-204ENST00000472959 ATP2B2Q01814 1243 aa24.57■■□□□ 1.52
TOP3A-204ENST00000472959 TAF1CQ15572 869 aaPredicted RBP24.57■■□□□ 1.52
TOP3A-204ENST00000472959 CEP95Q96GE4 821 aa24.57■■□□□ 1.52
TOP3A-204ENST00000472959 KRT23Q9C075 422 aa24.57■■□□□ 1.52
TOP3A-204ENST00000472959 SYNPO2Q9UMS6 1093 aa24.57■■□□□ 1.52
TOP3A-204ENST00000472959 REC8O95072 547 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 TBC1D8O95759 1140 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 TTLL1O95922 423 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 CRHR2Q13324 411 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 NOM1Q5C9Z4 860 aaKnown RBP24.56■■□□□ 1.52
TOP3A-204ENST00000472959 TREML2Q5T2D2 321 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 LPAR1Q92633 364 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 PARK7Q99497 189 aaKnown RBP24.56■■□□□ 1.52
TOP3A-204ENST00000472959 TCP11L1Q9NUJ3 509 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 NEDD4P46934 1319 aa24.56■■□□□ 1.52
TOP3A-204ENST00000472959 HSPA8P11142 646 aaKnown RBP24.55■■□□□ 1.52
TOP3A-204ENST00000472959 HOXA7P31268 230 aaPredicted RBP24.55■■□□□ 1.52
TOP3A-204ENST00000472959 ZYXQ15942 572 aaKnown RBP24.55■■□□□ 1.52
TOP3A-204ENST00000472959 MKL1Q969V6 931 aa24.55■■□□□ 1.52
TOP3A-204ENST00000472959 GOPCQ9HD26 462 aa24.55■■□□□ 1.52
TOP3A-204ENST00000472959 PNMA3Q9UL41 463 aa24.55■■□□□ 1.52
TOP3A-204ENST00000472959 MYH8P13535 1937 aa24.55■■□□□ 1.52
TOP3A-204ENST00000472959 TRDNQ13061 729 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 DGKZQ13574 1117 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 NECTIN1Q15223 517 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 VCPKMTQ9H867 229 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 IL17RBQ9NRM6 502 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 CLIP2Q9UDT6 1046 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 TSKSQ9UJT2 592 aa24.54■■□□□ 1.52
TOP3A-204ENST00000472959 OSBPP22059 807 aa24.53■■□□□ 1.52
TOP3A-204ENST00000472959 CCDC178Q5BJE1 867 aa24.53■■□□□ 1.52
TOP3A-204ENST00000472959 RNF20Q5VTR2 975 aa24.53■■□□□ 1.52
TOP3A-204ENST00000472959 B4E1Z4 1266 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 SLC27A2O14975 620 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 EPB41L2O43491 1005 aaKnown RBP24.52■■□□□ 1.52
TOP3A-204ENST00000472959 TLR2O60603 784 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 KDM4AO75164 1064 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms