RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 DHX32Q7L7V1 743 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 MAP3K20Q9NYL2 800 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 PCDHGB3Q9Y5G1 929 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 NESP48681 1621 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 PDE2AO00408 941 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 RPLP1P05386 114 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 MAPTP10636 758 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 GNPTABQ3T906 1256 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 LLGL2Q6P1M3 1020 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 XRRA1Q6P2D8 792 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 DGKHQ86XP1 1220 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 TEX2Q8IWB9 1127 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 TMTC2Q8N394 836 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 MPNDQ8N594 471 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 ST13P5Q8NFI4 369 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 DHRS4Q9BTZ2 278 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 APOL5Q9BWW9 433 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 BHLHE41Q9C0J9 482 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 SMARCA4P51532 1647 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 GPR39O43194 453 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 H2AFYO75367 372 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 F2P00734 622 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 BDNFP23560 247 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 ECE1P42892 770 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 NEK4P51957 841 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 SPEM2Q0P670 501 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 CCINQ13939 588 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 ZNF267Q14586 743 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 DENND5AQ6IQ26 1287 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 EPM2AIP1Q7L775 607 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 EEPD1Q7L9B9 569 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 ZNF598Q86UK7 904 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 REXO1Q8N1G1 1221 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 MAGEB6Q8N7X4 407 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 RBBP8NLQ8NC74 664 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 ZSWIM2Q8NEG5 633 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 TMEM40Q8WWA1 233 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 OSBP2Q969R2 916 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 TMX1Q9H3N1 280 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 PCDHA4Q9UN74 947 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 hCG_1642624A0A1W2PR95 340 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 SPATA31C2B4DYI2 1134 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 PRKD3O94806 890 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 ABLIM3O94929 683 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 SRGNP10124 158 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 CYP4F3Q08477 520 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 FAM83BQ5T0W9 1011 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 CLEC4GQ6UXB4 293 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 ZNF513Q8N8E2 541 aaPredicted RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 XAGE3Q8WTP9 111 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 E2F7Q96AV8 911 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 CDC6Q99741 560 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 CLEC4MQ9H2X3 399 aaPredicted RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 AVENQ9NQS1 362 aaPredicted RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 GJA3Q9Y6H8 435 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 ARAP1Q96P48 1450 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 B3GALT4O96024 378 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 CPB1P15086 417 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 PCBP4P57723 403 aaKnown RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 HTRA3P83110 453 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 RPL6Q02878 288 aaKnown RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 PCDH1Q08174 1060 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 BRD3Q15059 726 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 NTRK3Q16288 839 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 RIPOR1Q6ZS17 1223 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 NLRC3Q7RTR2 1065 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 LYSMD3Q7Z3D4 306 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 CCAR1Q8IX12 1150 aaKnown RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 LRRN4CLQ8ND94 238 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 SLC6A18Q96N87 628 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 FBRSQ9HAH7 460 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 TLR7Q9NYK1 1049 aaKnown RBP3.46□□□□□ -1.86
XRN1-210ENST00000472697 PCDHA9Q9Y5H5 950 aa3.46□□□□□ -1.86
XRN1-210ENST00000472697 A0A1B0GTH6 734 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 ARNTLO00327 626 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 IFRD1O00458 451 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 SOX1O00570 391 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 SHOXO15266 292 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 FOSP01100 380 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 NME1P15531 152 aaKnown RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 EPB42P16452 691 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 LMNB1P20700 586 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 ADCYAP1R1P41586 468 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 RPIAP49247 311 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 SNW1Q13573 536 aaKnown RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 PLA2G4EQ3MJ16 856 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 FAM102BQ5T8I3 360 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 GDF6Q6KF10 455 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 SYDE1Q6ZW31 735 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 NLRP8Q86W28 1048 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 ACSF2Q96CM8 615 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 SLC2A13Q96QE2 648 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PBX4Q9BYU1 374 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 OBP2AQ9NY56 170 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 MCM8Q9UJA3 840 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 COQ6Q9Y2Z9 468 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 TACC3Q9Y6A5 838 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms