RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 TSPY2A6NKD2 308 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 PLCD1P51178 756 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 TERF1P54274 439 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 AKAP17AQ02040 695 aaKnown RBP17.27■□□□□ 0.36
UBXN11-213ENST00000472155 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 EPSTI1Q96J88 318 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 TIGD1Q96MW7 591 aa17.27■□□□□ 0.36
UBXN11-213ENST00000472155 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
UBXN11-213ENST00000472155 GYS1P13807 737 aa17.27■□□□□ 0.35
UBXN11-213ENST00000472155 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.35
UBXN11-213ENST00000472155 TGFBRAP1Q8WUH2 860 aa17.27■□□□□ 0.35
UBXN11-213ENST00000472155 CCDC88AQ3V6T2 1871 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
UBXN11-213ENST00000472155 ORC4O43929 436 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 LDHBP07195 334 aaKnown RBP17.26■□□□□ 0.35
UBXN11-213ENST00000472155 ZNF174Q15697 407 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 ATP8A2Q9NTI2 1148 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 RGL2O15211 777 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 RCAN1P53805 252 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 CCZ1BP86790 482 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 CCZ1P86791 482 aaPredicted RBP17.26■□□□□ 0.35
UBXN11-213ENST00000472155 TFAP4Q01664 338 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 SLC35G1Q2M3R5 365 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
UBXN11-213ENST00000472155 USP5P45974 858 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 GOLGA8FQ08AF8 430 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 GOLGA8DPQ0D2H9 430 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 MYRIPQ8NFW9 859 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
UBXN11-213ENST00000472155 BPIFA3Q9BQP9 254 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
UBXN11-213ENST00000472155 LAMB1P07942 1786 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
UBXN11-213ENST00000472155 UFL1O94874 794 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 SKILP12757 684 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 HSPA1LP34931 641 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 KRT2P35908 639 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 TNFRSF25Q93038 417 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 ARID3AQ99856 593 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 ARPP21Q9UBL0 812 aaPredicted RBP17.24■□□□□ 0.35
UBXN11-213ENST00000472155 SERPINB2P05120 415 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBXN11-213ENST00000472155 TRMT44Q8IYL2 757 aaKnown RBP17.24■□□□□ 0.35
UBXN11-213ENST00000472155 MED15Q96RN5 788 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 FANCLQ9NW38 375 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 TRMT1Q9NXH9 659 aaKnown RBP17.24■□□□□ 0.35
UBXN11-213ENST00000472155 SRPRBQ9Y5M8 271 aaKnown RBP17.24■□□□□ 0.35
UBXN11-213ENST00000472155 XDHP47989 1333 aa17.24■□□□□ 0.35
UBXN11-213ENST00000472155 RIOK3O14730 519 aaKnown RBP17.23■□□□□ 0.35
UBXN11-213ENST00000472155 FANCCQ00597 558 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 DDR1Q08345 913 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 TYW1BQ6NUM6 668 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 ARMCX5Q6P1M9 558 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 STAMQ92783 540 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 MAN1B1Q9UKM7 699 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 TMEM232C9JQI7 657 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
UBXN11-213ENST00000472155 POSTNQ15063 836 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
UBXN11-213ENST00000472155 RPGRQ92834 1020 aaKnown RBP17.23■□□□□ 0.35
UBXN11-213ENST00000472155 DHX58Q96C10 678 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
UBXN11-213ENST00000472155 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 DDAH1O94760 285 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 TRIM37O94972 964 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 LEMD3Q9Y2U8 911 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 SPATA31A6Q5VVP1 1343 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 AFMP43652 599 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
UBXN11-213ENST00000472155 FAM205AQ6ZU69 1335 aa17.22■□□□□ 0.35
UBXN11-213ENST00000472155 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
UBXN11-213ENST00000472155 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
UBXN11-213ENST00000472155 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
UBXN11-213ENST00000472155 IL17AQ16552 155 aa17.21■□□□□ 0.35
UBXN11-213ENST00000472155 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
UBXN11-213ENST00000472155 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
UBXN11-213ENST00000472155 UBR3Q6ZT12 1888 aa17.21■□□□□ 0.35
UBXN11-213ENST00000472155 COBLO75128 1261 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 SCG2P13521 617 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 CDC25AP30304 524 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 BTDP43251 543 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 PTGDRQ13258 359 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
UBXN11-213ENST00000472155 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 UTRNP46939 3433 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 MYL5Q02045 173 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms