RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SPP2Q13103 211 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 MTX1Q13505 466 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 ARHGAP45Q92619 1136 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 NEUROD6Q96NK8 337 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 MEIS3Q99687 375 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
CPSF4-211ENST00000471455 PRO3102Q9H379 93 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 TMOD4Q9NZQ9 345 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.61
CPSF4-211ENST00000471455 HMGCS2P54868 508 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
CPSF4-211ENST00000471455 TREML2Q5T2D2 321 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
CPSF4-211ENST00000471455 SOCS4Q8WXH5 440 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 NSUN4Q96CB9 384 aaKnown RBP11.21□□□□□ -0.61
CPSF4-211ENST00000471455 GINM1Q9NU53 330 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 HMG20BQ9P0W2 317 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 LRP2BPQ9P2M1 347 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.61
CPSF4-211ENST00000471455 RPTORQ8N122 1335 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 ASNSP08243 561 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 CAP2P40123 477 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 SH3D19Q5HYK7 790 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 TRMT2AQ8IZ69 625 aaKnown RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 CDCA7LQ96GN5 454 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 PAWRQ96IZ0 340 aaKnown RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
CPSF4-211ENST00000471455 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 NPDC1Q9NQX5 325 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-211ENST00000471455 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 GNAI2P04899 355 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 CCDC84Q86UT8 332 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-211ENST00000471455 CCAR1Q8IX12 1150 aaKnown RBP11.19□□□□□ -0.62
CPSF4-211ENST00000471455 WDR18Q9BV38 432 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-211ENST00000471455 MORF4L1Q9UBU8 362 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 RABGEF1Q9UJ41 708 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 ATAD5Q96QE3 1844 aa11.19□□□□□ -0.62
CPSF4-211ENST00000471455 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 FAM196BA6NMK8 535 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 C19orf81C9J6K1 198 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 BACE1P56817 501 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 MTMR2Q13614 643 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 CCDC158Q5M9N0 1113 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 NAA16Q6N069 864 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-211ENST00000471455 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-211ENST00000471455 GPRC5AQ8NFJ5 357 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 C11orf49Q9H6J7 331 aa11.18□□□□□ -0.62
CPSF4-211ENST00000471455 XRCC5P13010 732 aaKnown RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 MAPK4P31152 587 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 BMP8BP34820 402 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 TTC39AQ5SRH9 613 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 C7orf61Q8IZ16 206 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 SLC17A8Q8NDX2 589 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 CWC22Q9HCG8 908 aaKnown RBP11.17□□□□□ -0.62
CPSF4-211ENST00000471455 STAP2Q9UGK3 403 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
CPSF4-211ENST00000471455 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
CPSF4-211ENST00000471455 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 GLRX3O76003 335 aaKnown RBP11.16□□□□□ -0.62
CPSF4-211ENST00000471455 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 RGS2P41220 211 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 MCAMP43121 646 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 HERVK_113P62684 666 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 PI16Q6UXB8 463 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-211ENST00000471455 DIS3LQ8TF46 1054 aaKnown RBP11.16□□□□□ -0.62
CPSF4-211ENST00000471455 GPR108Q9NPR9 543 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
CPSF4-211ENST00000471455 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 GJD2Q9UKL4 321 aa11.16□□□□□ -0.62
CPSF4-211ENST00000471455 FLT1P17948 1338 aa11.15□□□□□ -0.62
CPSF4-211ENST00000471455 CYP2B6P20813 491 aa11.15□□□□□ -0.62
CPSF4-211ENST00000471455 PPP4CP60510 307 aa11.15□□□□□ -0.62
CPSF4-211ENST00000471455 CCNA1P78396 465 aa11.15□□□□□ -0.62
CPSF4-211ENST00000471455 MAP3K21Q5TCX8 1036 aa11.15□□□□□ -0.62
CPSF4-211ENST00000471455 TMED8Q6PL24 325 aaPredicted RBP11.15□□□□□ -0.62
CPSF4-211ENST00000471455 TRIB2Q92519 343 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms