RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 BMP6P22004 513 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 MDM2Q00987 491 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 KIF23Q02241 960 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 IFT88Q13099 833 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 RIPK1Q13546 671 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 ANKRD20A8PQ5CZ79 823 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 CAPRIN2Q6IMN6 1127 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 APTXQ7Z2E3 356 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 APLFQ8IW19 511 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 SEC62Q99442 399 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 RABEP2Q9H5N1 569 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 ADD3Q9UEY8 706 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 IQSEC3Q9UPP2 1182 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 COL15A1P39059 1388 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 CHD1O14646 1710 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 MLH3Q9UHC1 1453 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 EME2A4GXA9 379 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 HMGB1P1B2RPK0 211 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 GYPCP04921 128 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 POLR3DP05423 398 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 CDC27P30260 824 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 MDH1P40925 334 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 SARSP49591 514 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 RAB27AP51159 221 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 POSTNQ15063 836 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 GLE1Q53GS7 698 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 SPATA1Q5VX52 437 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 MFN1Q8IWA4 741 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 DRAXINQ8NBI3 349 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 SPAG5Q96R06 1193 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 ABHD10Q9NUJ1 306 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 UBN2Q6ZU65 1347 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 SH3TC1Q8TE82 1336 aa10.12□□□□□ -0.79
SMARCE1-207ENST00000469334 ZNF609O15014 1411 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 SLIT1O75093 1534 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 KDM3BQ7LBC6 1761 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 ECM2O94769 699 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 HOXB7P09629 217 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 NR1D1P20393 614 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 CASP14P31944 242 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 ERVK-24P63145 666 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 HDLBPQ00341 1268 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 IDI1Q13907 227 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 MCMDC2Q4G0Z9 681 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 STOX1Q6ZVD7 989 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 GSPT2Q8IYD1 628 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 TRIM58Q8NG06 486 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 CUL5Q93034 780 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 JAKMIP2Q96AA8 810 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 ARL8AQ96BM9 186 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 DSCC1Q9BVC3 393 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 SLC39A2Q9NP94 309 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 KCNH3Q9ULD8 1083 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 C15orf41Q9Y2V0 281 aa10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 SETD1BQ9UPS6 1966 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-207ENST00000469334 FRMD3A2A2Y4 597 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 BUB1BO60566 1050 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 SMNDC1O75940 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 ATP6V1G2O95670 118 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 PTPAQ15257 358 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 E2F5Q15329 346 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 MTHFSDQ2M296 383 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 CCDC38Q502W7 563 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 CDKAL1Q5VV42 579 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 MIS18BP1Q6P0N0 1132 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 FOXP4Q8IVH2 680 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 MREGQ8N565 214 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 PARD3BQ8TEW8 1205 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 EAF2Q96CJ1 260 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 CYFIP2Q96F07 1278 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 BORCS6Q96GS4 357 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 RNPC3Q96LT9 517 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 GDAP1L1Q96MZ0 367 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 MOV10L1Q9BXT6 1211 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 LRRC2Q9BYS8 371 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 NCOA5Q9HCD5 579 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 HAUS2Q9NVX0 235 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 TEX33O43247 280 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 LUC7L3O95232 432 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 ATP1A1P05023 1023 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 ANKRD27Q96NW4 1050 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 BOLA2Q9H3K6 86 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 KDM4CQ9H3R0 1056 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 NOD2Q9HC29 1040 aa10.1□□□□□ -0.79
SMARCE1-207ENST00000469334 SAMSN1Q9NSI8 373 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms