RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RABGAP1Q9Y3P9 1069 aa24.09■■□□□ 1.45
VARS-221ENST00000463184 CCNA1P78396 465 aa24.08■■□□□ 1.45
VARS-221ENST00000463184 CERKLQ49MI3 558 aaPredicted RBP24.08■■□□□ 1.45
VARS-221ENST00000463184 POTEEQ6S8J3 1075 aa24.08■■□□□ 1.45
VARS-221ENST00000463184 FEZ1Q99689 392 aa24.08■■□□□ 1.45
VARS-221ENST00000463184 ZMYND8Q9ULU4 1186 aaPredicted RBP24.08■■□□□ 1.45
VARS-221ENST00000463184 SOX1O00570 391 aaPredicted RBP24.07■■□□□ 1.44
VARS-221ENST00000463184 RLBP1P12271 317 aa24.07■■□□□ 1.44
VARS-221ENST00000463184 ERC1Q8IUD2 1116 aa24.07■■□□□ 1.44
VARS-221ENST00000463184 APBA2Q99767 749 aa24.07■■□□□ 1.44
VARS-221ENST00000463184 ANTXR1Q9H6X2 564 aa24.07■■□□□ 1.44
VARS-221ENST00000463184 CWC22Q9HCG8 908 aaKnown RBP24.07■■□□□ 1.44
VARS-221ENST00000463184 NDUFB9Q9Y6M9 179 aa24.07■■□□□ 1.44
VARS-221ENST00000463184 MYH1P12882 1939 aa24.07■■□□□ 1.44
VARS-221ENST00000463184 GLRX3O76003 335 aaKnown RBP24.06■■□□□ 1.44
VARS-221ENST00000463184 RAB3GAP1Q15042 981 aa24.06■■□□□ 1.44
VARS-221ENST00000463184 ZYXQ15942 572 aaKnown RBP24.06■■□□□ 1.44
VARS-221ENST00000463184 ABCB5Q2M3G0 1257 aa24.06■■□□□ 1.44
VARS-221ENST00000463184 CEP85Q6P2H3 762 aa24.06■■□□□ 1.44
VARS-221ENST00000463184 CATSPERGQ6ZRH7 1159 aa24.06■■□□□ 1.44
VARS-221ENST00000463184 KIAA1683Q9H0B3 1180 aa24.06■■□□□ 1.44
VARS-221ENST00000463184 CABP5Q9NP86 173 aa24.06■■□□□ 1.44
VARS-221ENST00000463184 DDX60LQ5H9U9 1706 aaKnown RBP24.06■■□□□ 1.44
VARS-221ENST00000463184 CCL14Q16627 93 aa24.05■■□□□ 1.44
VARS-221ENST00000463184 AACSQ86V21 672 aa24.05■■□□□ 1.44
VARS-221ENST00000463184 LRCH3Q96II8 777 aa24.05■■□□□ 1.44
VARS-221ENST00000463184 LAMA3Q16787 3333 aa24.05■■□□□ 1.44
VARS-221ENST00000463184 CNMDO75829 334 aa24.04■■□□□ 1.44
VARS-221ENST00000463184 MAP2K5Q13163 448 aa24.04■■□□□ 1.44
VARS-221ENST00000463184 LHX8Q68G74 356 aa24.04■■□□□ 1.44
VARS-221ENST00000463184 LBX2Q6XYB7 198 aa24.04■■□□□ 1.44
VARS-221ENST00000463184 EDC3Q96F86 508 aaKnown RBP24.04■■□□□ 1.44
VARS-221ENST00000463184 RIOK1Q9BRS2 568 aaKnown RBP24.04■■□□□ 1.44
VARS-221ENST00000463184 PFASO15067 1338 aa24.04■■□□□ 1.44
VARS-221ENST00000463184 COL6A1P12109 1028 aa24.03■■□□□ 1.44
VARS-221ENST00000463184 SYN1P17600 705 aa24.03■■□□□ 1.44
VARS-221ENST00000463184 VCAM1P19320 739 aa24.03■■□□□ 1.44
VARS-221ENST00000463184 CCND3P30281 292 aaPredicted RBP24.03■■□□□ 1.44
VARS-221ENST00000463184 TTF1Q15361 905 aaPredicted RBP24.03■■□□□ 1.44
VARS-221ENST00000463184 HSP90AB4PQ58FF6 505 aa24.03■■□□□ 1.44
VARS-221ENST00000463184 GPR153Q6NV75 609 aa24.03■■□□□ 1.44
VARS-221ENST00000463184 EXOC6BQ9Y2D4 811 aa24.03■■□□□ 1.44
VARS-221ENST00000463184 POLR3DP05423 398 aaPredicted RBP24.02■■□□□ 1.44
VARS-221ENST00000463184 SHMT1P34896 483 aa24.02■■□□□ 1.44
VARS-221ENST00000463184 MAGEA10P43363 369 aaPredicted RBP24.02■■□□□ 1.44
VARS-221ENST00000463184 PLCD1P51178 756 aa24.02■■□□□ 1.44
VARS-221ENST00000463184 ACER1Q8TDN7 264 aa24.02■■□□□ 1.44
VARS-221ENST00000463184 MAGEB6P1A0A0J9YX57 407 aa24.01■■□□□ 1.43
VARS-221ENST00000463184 SLC15A5A6NIM6 579 aa24.01■■□□□ 1.43
VARS-221ENST00000463184 PTPREP23469 700 aa24.01■■□□□ 1.43
VARS-221ENST00000463184 WDR78Q5VTH9 848 aa24.01■■□□□ 1.43
VARS-221ENST00000463184 MFSD14CQ5VZR4 134 aa24.01■■□□□ 1.43
VARS-221ENST00000463184 IVNS1ABPQ9Y6Y0 642 aa24.01■■□□□ 1.43
VARS-221ENST00000463184 LRIT3Q3SXY7 679 aa24■■□□□ 1.43
VARS-221ENST00000463184 HOXC6P09630 235 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 GUCY1A2P33402 732 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 GABPAQ06546 454 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 SLC9C2Q5TAH2 1124 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 TDHQ8IZJ6 230 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 RHPN1Q8TCX5 695 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 CRNKL1Q9BZJ0 848 aaKnown RBP23.99■■□□□ 1.43
VARS-221ENST00000463184 RPAP3Q9H6T3 665 aaPredicted RBP23.99■■□□□ 1.43
VARS-221ENST00000463184 BTBD7Q9P203 1132 aa23.99■■□□□ 1.43
VARS-221ENST00000463184 SPDYE16A6NNV3 312 aaPredicted RBP23.98■■□□□ 1.43
VARS-221ENST00000463184 GRB14Q14449 540 aa23.98■■□□□ 1.43
VARS-221ENST00000463184 SLC17A8Q8NDX2 589 aa23.98■■□□□ 1.43
VARS-221ENST00000463184 UBE2OQ9C0C9 1292 aaKnown RBP23.98■■□□□ 1.43
VARS-221ENST00000463184 IL1RAPL2Q9NP60 686 aa23.98■■□□□ 1.43
VARS-221ENST00000463184 FLRT1Q9NZU1 646 aa23.98■■□□□ 1.43
VARS-221ENST00000463184 MSCO60682 206 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 PDE6AP16499 860 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 ATP2B2Q01814 1243 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 SEPT2Q15019 361 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 LRRC26Q2I0M4 334 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.97■■□□□ 1.43
VARS-221ENST00000463184 MCM9Q9NXL9 1143 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 HOXC10Q9NYD6 342 aa23.97■■□□□ 1.43
VARS-221ENST00000463184 CLASRPQ8N2M8 674 aaKnown RBP23.96■■□□□ 1.43
VARS-221ENST00000463184 DDX20Q9UHI6 824 aaKnown RBP23.96■■□□□ 1.43
VARS-221ENST00000463184 ZNF532Q9HCE3 1301 aa23.95■■□□□ 1.42
VARS-221ENST00000463184 MPHOSPH10O00566 681 aaKnown RBP23.95■■□□□ 1.42
VARS-221ENST00000463184 COG2Q14746 738 aa23.95■■□□□ 1.42
VARS-221ENST00000463184 PANK1Q8TE04 598 aa23.95■■□□□ 1.42
VARS-221ENST00000463184 KIF1BPQ96EK5 621 aa23.95■■□□□ 1.42
VARS-221ENST00000463184 COL6A3P12111 3177 aa23.95■■□□□ 1.42
VARS-221ENST00000463184 STRNO43815 780 aa23.94■■□□□ 1.42
VARS-221ENST00000463184 DEFB123Q8N688 67 aa23.94■■□□□ 1.42
VARS-221ENST00000463184 NPLOC4Q8TAT6 608 aa23.94■■□□□ 1.42
VARS-221ENST00000463184 LPAR1Q92633 364 aa23.94■■□□□ 1.42
VARS-221ENST00000463184 DCP1AQ9NPI6 582 aaPredicted RBP23.94■■□□□ 1.42
VARS-221ENST00000463184 A0A1W2PRG0 241 aa23.93■■□□□ 1.42
VARS-221ENST00000463184 MS4A1P11836 297 aa23.93■■□□□ 1.42
VARS-221ENST00000463184 CNGA1P29973 690 aa23.93■■□□□ 1.42
VARS-221ENST00000463184 RPAP2Q8IXW5 612 aaPredicted RBP23.93■■□□□ 1.42
VARS-221ENST00000463184 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
VARS-221ENST00000463184 DNAJC2Q99543 621 aaKnown RBP23.93■■□□□ 1.42
VARS-221ENST00000463184 SENP6Q9GZR1 1112 aaPredicted RBP23.93■■□□□ 1.42
VARS-221ENST00000463184 SWAP70Q9UH65 585 aa23.93■■□□□ 1.42
VARS-221ENST00000463184 TCRBV5S4A2TA0A5A2 114 aa23.92■■□□□ 1.42
VARS-221ENST00000463184 GOLIM4O00461 696 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms