RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 PFDN4Q9NQP4 134 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 BIN2Q9UBW5 565 aaPredicted RBP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 PTPRTO14522 1441 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 MYL1P05976 194 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CUL4BQ13620 913 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 AKNAD1Q5T1N1 836 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 IFNKQ9P0W0 207 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CRCPO75575 148 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 PCCAP05165 728 aaPredicted RBP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CNPY4Q8N129 248 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 BBOF1Q8ND07 529 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 LRRC2Q9BYS8 371 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 GUCA1BQ9UMX6 200 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 DAPK3O43293 454 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CCNA1P78396 465 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 RAPGEF1Q13905 1077 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 SNX29Q8TEQ0 813 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 ANKARQ7Z5J8 1434 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 RIMBP2O15034 1052 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 RPS8P62241 208 aaKnown RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 MAP3K21Q5TCX8 1036 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 TSHZ3Q63HK5 1081 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 INTS8Q75QN2 995 aaKnown RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 ATRIPQ8WXE1 791 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 ATG3Q9NT62 314 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 GOLGA8QA0A0J9YX86 632 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 GOLGA8OA6NCC3 632 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 GOLGA8NF8WBI6 632 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 PPP2R5AQ15172 486 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 MUM1L1Q5H9M0 696 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 VPS52Q8N1B4 723 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 VCXQ9H320 206 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 SLAIN2Q9P270 581 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 TTC37Q6PGP7 1564 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 PAK2Q13177 524 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 MAN1A1P33908 653 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 IRX4P78413 519 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 FAM160B1Q5W0V3 765 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 SECISBP2LQ93073 1101 aaKnown RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 USP14P54578 494 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 C8orf74Q6P047 294 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 ZBTB38Q8NAP3 1195 aaPredicted RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 RNF34Q969K3 372 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 CDHR1Q96JP9 859 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 THAP12O43422 761 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 TERF1P54274 439 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 BPIFB4P59827 614 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 PPFIA1Q13136 1202 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 ISM2Q6H9L7 571 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 TRIM11Q96F44 468 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 CTNND2Q9UQB3 1225 aa9.36□□□□□ -0.91
MCF2L2-205ENST00000461074 CFAP221Q4G0U5 840 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 GPATCH4Q5T3I0 446 aaKnown RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 ADPGKQ9BRR6 497 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 B4E1Z4 1266 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PTGS1P23219 599 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 TMOD1P28289 359 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PAIP2Q9BPZ3 127 aaKnown RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 MED23Q9ULK4 1368 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 ELMSAN1Q6PJG2 1045 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 BZW2Q9Y6E2 419 aaKnown RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 GTF2F1P35269 517 aaKnown RBP eCLIP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 POSTNQ15063 836 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 ZNF174Q15697 407 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 SFMBT2Q5VUG0 894 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PIK3AP1Q6ZUJ8 805 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 SELENOSQ9BQE4 189 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PRPF6O94906 941 aaKnown RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 GCFC2P16383 781 aaKnown RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 TFDP1Q14186 410 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 STMN2Q93045 179 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 FAM89AQ96GI7 184 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 USP21Q9UK80 565 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 F8W8V4 182 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PHBP35232 272 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 UBE3CQ15386 1083 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 POTEDQ86YR6 584 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 CACNA2D3Q8IZS8 1091 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms