RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ZAR1Q86SH2 424 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 SHISA5Q8N114 240 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 Q8N3U1 123 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 PMFBP1Q8TBY8 1022 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 PSMG3-AS1Q96PY0 264 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 SLC9A7Q96T83 725 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 DUSP23Q9BVJ7 150 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 H2AFB2P0C5Z0 115 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 FSTP19883 344 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 GUCY2CP25092 1073 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
VBP1-202ENST00000460509 DUSP27Q5VZP5 1158 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 CKAP2LQ8IYA6 745 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 SEMA6BQ9H3T3 888 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 ATG3Q9NT62 314 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 PRKAG3Q9UGI9 489 aa7.33□□□□□ -1.24
VBP1-202ENST00000460509 RGS13O14921 159 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 IGLV1-40P01703 118 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 F13BP05160 661 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 ACRP10323 421 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 CYP27C1Q4G0S4 372 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 LARP1BQ659C4 914 aaKnown RBP7.32□□□□□ -1.24
VBP1-202ENST00000460509 OGFOD3Q6PK18 319 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 ARHGAP27Q6ZUM4 889 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 ZNF765Q7L2R6 523 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 TTC6Q86TZ1 520 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 SHKBP1Q8TBC3 707 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 HNRNPLLQ8WVV9 542 aaKnown RBP7.32□□□□□ -1.24
VBP1-202ENST00000460509 UBXN4Q92575 508 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 HIRIP3Q9BW71 556 aaPredicted RBP7.32□□□□□ -1.24
VBP1-202ENST00000460509 OSBPL1AQ9BXW6 950 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 FAM86C1Q9NVL1 165 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 ACTR10Q9NZ32 417 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 CEP131Q9UPN4 1083 aa7.32□□□□□ -1.24
VBP1-202ENST00000460509 TNFRSF10CO14798 259 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 GSC2O15499 205 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 DYRK3O43781 588 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 ZYXQ15942 572 aaKnown RBP7.31□□□□□ -1.24
VBP1-202ENST00000460509 NKAPLQ5M9Q1 402 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 INTS3Q68E01 1043 aaKnown RBP7.31□□□□□ -1.24
VBP1-202ENST00000460509 UNC5AQ6ZN44 842 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 TNKS2Q9H2K2 1166 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 LRRC4CQ9HCJ2 640 aa7.31□□□□□ -1.24
VBP1-202ENST00000460509 A0A1W2PQH9 124 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 CLEC3AO75596 197 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 UBOX5O94941 541 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 CBX7O95931 251 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 CYP7A1P22680 504 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 ETV3P41162 512 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 CYP27A1Q02318 531 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 ZNF746Q6NUN9 644 aaPredicted RBP7.3□□□□□ -1.24
VBP1-202ENST00000460509 GATA6Q92908 595 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 ZNF512BQ96KM6 892 aaPredicted RBP7.3□□□□□ -1.24
VBP1-202ENST00000460509 SLC6A18Q96N87 628 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 PRDM5Q9NQX1 630 aaPredicted RBP7.3□□□□□ -1.24
VBP1-202ENST00000460509 ST7Q9NRC1 585 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 PCDHB10Q9UN67 800 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 SLC12A7Q9Y666 1083 aa7.3□□□□□ -1.24
VBP1-202ENST00000460509 RBAK-RBAKDNI3L0D1 243 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
VBP1-202ENST00000460509 IGSF3O75054 1194 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 EOMESO95936 686 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 TP53P04637 393 aaPredicted RBP7.29□□□□□ -1.24
VBP1-202ENST00000460509 TMEM192Q8IY95 271 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 TAB3Q8N5C8 712 aaPredicted RBP7.29□□□□□ -1.24
VBP1-202ENST00000460509 PPP1R13LQ8WUF5 828 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 DHRS1Q96LJ7 313 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.29□□□□□ -1.24
VBP1-202ENST00000460509 GTF2IRD1Q9UHL9 959 aa7.29□□□□□ -1.24
VBP1-202ENST00000460509 DDAH1O94760 285 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 CCNFP41002 786 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 CASP7P55210 303 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 GNPTABQ3T906 1256 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 SFRP5Q5T4F7 317 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 TDRD10Q5VZ19 366 aaKnown RBP7.28□□□□□ -1.24
VBP1-202ENST00000460509 KRTAP1-3Q8IUG1 177 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 C19orf47Q8N9M1 422 aaKnown RBP7.28□□□□□ -1.24
VBP1-202ENST00000460509 DNAJB8Q8NHS0 232 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 KREMEN1Q96MU8 473 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 METTL22Q9BUU2 404 aaPredicted RBP7.28□□□□□ -1.24
VBP1-202ENST00000460509 MKRN2Q9H000 416 aaKnown RBP7.28□□□□□ -1.24
VBP1-202ENST00000460509 LEMD3Q9Y2U8 911 aa7.28□□□□□ -1.24
VBP1-202ENST00000460509 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
VBP1-202ENST00000460509 LTBP3Q9NS15 1303 aa7.27□□□□□ -1.24
VBP1-202ENST00000460509 CCDC85CA6NKD9 419 aa7.27□□□□□ -1.25
VBP1-202ENST00000460509 GNAT3A8MTJ3 354 aa7.27□□□□□ -1.25
VBP1-202ENST00000460509 ITIH2P19823 946 aa7.27□□□□□ -1.25
VBP1-202ENST00000460509 FAM181AQ8N9Y4 354 aa7.27□□□□□ -1.25
VBP1-202ENST00000460509 CYP26A1O43174 497 aa7.26□□□□□ -1.25
VBP1-202ENST00000460509 RBL2Q08999 1139 aa7.26□□□□□ -1.25
VBP1-202ENST00000460509 FXNQ16595 210 aa7.26□□□□□ -1.25
VBP1-202ENST00000460509 PRSS36Q5K4E3 855 aa7.26□□□□□ -1.25
VBP1-202ENST00000460509 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms