RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 SPATA32Q96LK8 384 aa20.14■□□□□ 0.81
CDK11A-209ENST00000460465 GMLQ99445 158 aa20.14■□□□□ 0.81
CDK11A-209ENST00000460465 RNF26Q9BY78 433 aaPredicted RBP20.14■□□□□ 0.81
CDK11A-209ENST00000460465 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
CDK11A-209ENST00000460465 ARFGEF1Q9Y6D6 1849 aa20.14■□□□□ 0.81
CDK11A-209ENST00000460465 GOLGB1Q14789 3259 aaKnown RBP20.13■□□□□ 0.81
CDK11A-209ENST00000460465 KIF23Q02241 960 aaPredicted RBP20.13■□□□□ 0.81
CDK11A-209ENST00000460465 FUT2Q10981 343 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 TRIM29Q14134 588 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 TMTC3Q6ZXV5 915 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 LEO1Q8WVC0 666 aaPredicted RBP20.13■□□□□ 0.81
CDK11A-209ENST00000460465 ZBTB12Q9Y330 459 aaPredicted RBP20.13■□□□□ 0.81
CDK11A-209ENST00000460465 KIF28PB7ZC32 967 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 NFKBIEO00221 500 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 PRMT6Q96LA8 375 aaPredicted RBP20.13■□□□□ 0.81
CDK11A-209ENST00000460465 SWAP70Q9UH65 585 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 CFAP45Q9UL16 551 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 STX8Q9UNK0 236 aa20.13■□□□□ 0.81
CDK11A-209ENST00000460465 PLIN4Q96Q06 1357 aa20.12■□□□□ 0.81
CDK11A-209ENST00000460465 TMEM47Q9BQJ4 181 aa20.12■□□□□ 0.81
CDK11A-209ENST00000460465 TMEM63CQ9P1W3 806 aa20.12■□□□□ 0.81
CDK11A-209ENST00000460465 ZNF396Q96N95 335 aaPredicted RBP20.11■□□□□ 0.81
CDK11A-209ENST00000460465 HDAC9Q9UKV0 1011 aa20.11■□□□□ 0.81
CDK11A-209ENST00000460465 GREB1LQ9C091 1923 aaPredicted RBP20.11■□□□□ 0.81
CDK11A-209ENST00000460465 CNTNAP5Q8WYK1 1306 aa20.11■□□□□ 0.81
CDK11A-209ENST00000460465 NPM3O75607 178 aaKnown RBP20.11■□□□□ 0.81
CDK11A-209ENST00000460465 AKAP17AQ02040 695 aaKnown RBP20.11■□□□□ 0.81
CDK11A-209ENST00000460465 BRAPQ7Z569 592 aa20.11■□□□□ 0.81
CDK11A-209ENST00000460465 CEP95Q96GE4 821 aa20.11■□□□□ 0.81
CDK11A-209ENST00000460465 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDK11A-209ENST00000460465 EHD4Q9H223 541 aa20.11■□□□□ 0.81
CDK11A-209ENST00000460465 DHX36Q9H2U1 1008 aaKnown RBP20.11■□□□□ 0.81
CDK11A-209ENST00000460465 DDTLA6NHG4 134 aaPredicted RBP20.1■□□□□ 0.81
CDK11A-209ENST00000460465 PRPF3O43395 683 aaKnown RBP20.1■□□□□ 0.81
CDK11A-209ENST00000460465 KIF5BP33176 963 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 SHMT1P34896 483 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 CEBPZQ03701 1054 aaKnown RBP20.1■□□□□ 0.81
CDK11A-209ENST00000460465 CXCL9Q07325 125 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 ATL3Q6DD88 541 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 SRBD1Q8N5C6 995 aaKnown RBP20.1■□□□□ 0.81
CDK11A-209ENST00000460465 USP28Q96RU2 1077 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 MAP3K14Q99558 947 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 AKR1B1P15121 316 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 ZSCAN23Q3MJ62 389 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 SH3BP5LQ7L8J4 393 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 NLGN2Q8NFZ4 835 aa20.1■□□□□ 0.81
CDK11A-209ENST00000460465 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.1■□□□□ 0.81
CDK11A-209ENST00000460465 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 GRM4Q14833 912 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 PKN1Q16512 942 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 ZSCAN29Q8IWY8 852 aaPredicted RBP20.09■□□□□ 0.81
CDK11A-209ENST00000460465 OGFOD1Q8N543 542 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 JDP2Q8WYK2 163 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 V9GY48 417 aaPredicted RBP20.09■□□□□ 0.81
CDK11A-209ENST00000460465 hCG_1642624A0A1W2PR95 340 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 SLURP2P0DP57 97 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 AGBL3Q8NEM8 1001 aa20.09■□□□□ 0.81
CDK11A-209ENST00000460465 NOVP48745 357 aa20.08■□□□□ 0.81
CDK11A-209ENST00000460465 DLGAP5Q15398 846 aa20.08■□□□□ 0.81
CDK11A-209ENST00000460465 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.81
CDK11A-209ENST00000460465 DNAJC18Q9H819 358 aa20.08■□□□□ 0.81
CDK11A-209ENST00000460465 KCNJ14Q9UNX9 436 aa20.08■□□□□ 0.81
CDK11A-209ENST00000460465 MTMR7Q9Y216 660 aa20.08■□□□□ 0.81
CDK11A-209ENST00000460465 ENTPD3O75355 529 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 MMP1P03956 469 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 GNL2Q13823 731 aaKnown RBP20.08■□□□□ 0.8
CDK11A-209ENST00000460465 CIAPIN1Q6FI81 312 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 STAG2Q8N3U4 1231 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 PI4KBQ9UBF8 816 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 MYH4Q9Y623 1939 aa20.08■□□□□ 0.8
CDK11A-209ENST00000460465 IGKV6D-41A0A0C4DH26 115 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 TOP1P11387 765 aaKnown RBP20.07■□□□□ 0.8
CDK11A-209ENST00000460465 RASSF7Q02833 373 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 COL2A1P02458 1487 aaPredicted RBP20.07■□□□□ 0.8
CDK11A-209ENST00000460465 LTBP3Q9NS15 1303 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 ATRNL1Q5VV63 1379 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 SYAP1Q96A49 352 aaPredicted RBP20.07■□□□□ 0.8
CDK11A-209ENST00000460465 MTMR4Q9NYA4 1195 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 TMOD2Q9NZR1 351 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 RCOR1Q9UKL0 485 aa20.07■□□□□ 0.8
CDK11A-209ENST00000460465 CLRN2A0PK11 232 aa20.06■□□□□ 0.8
CDK11A-209ENST00000460465 FAM196BA6NMK8 535 aa20.06■□□□□ 0.8
CDK11A-209ENST00000460465 U2AF2P26368 475 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDK11A-209ENST00000460465 SHISA4Q96DD7 197 aa20.06■□□□□ 0.8
CDK11A-209ENST00000460465 PGBD1Q96JS3 809 aa20.06■□□□□ 0.8
CDK11A-209ENST00000460465 BAZ2BQ9UIF8 2168 aaKnown RBP20.06■□□□□ 0.8
CDK11A-209ENST00000460465 SAFBQ15424 915 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDK11A-209ENST00000460465 RASGRP2Q7LDG7 609 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 RTEL1Q9NZ71 1219 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 VPS54Q9P1Q0 977 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 ZNF70Q9UC06 446 aaPredicted RBP20.05■□□□□ 0.8
CDK11A-209ENST00000460465 FSD2A1L4K1 749 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 GOLGA6L3A6NEY3 463 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 GNAQP50148 359 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 ZNF445P59923 1031 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
CDK11A-209ENST00000460465 DIS3L2Q8IYB7 885 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms