RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 DYMQ7RTS9 669 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 FCHSD1Q86WN1 690 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
PTPRU-205ENST00000460170 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
PTPRU-205ENST00000460170 LAMC1P11047 1609 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 ADD2P35612 726 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 SLC1A4P43007 532 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 PLS1Q14651 629 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 CFAP58Q5T655 872 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 DDX12PQ92771 950 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 SECISBP2LQ93073 1101 aaKnown RBP16.5■□□□□ 0.23
PTPRU-205ENST00000460170 FRMD4BQ9Y2L6 1034 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 PCDHA5Q9Y5H7 936 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 SCG2P13521 617 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
PTPRU-205ENST00000460170 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
PTPRU-205ENST00000460170 PPP6R2O75170 966 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 IGKV5-2P06315 115 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 ACTN2P35609 894 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 ARFGAP2Q8N6H7 521 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 PCP11498 1178 aaKnown RBP16.49■□□□□ 0.23
PTPRU-205ENST00000460170 MAGEA1P43355 309 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 UBE4AQ14139 1066 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 IBSPP21815 317 aaPredicted RBP16.49■□□□□ 0.23
PTPRU-205ENST00000460170 LONRF3Q496Y0 759 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 SLC9C1Q4G0N8 1177 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 LINC00301Q8NCQ3 95 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
PTPRU-205ENST00000460170 IMPG2Q9BZV3 1241 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
PTPRU-205ENST00000460170 SH2D4AQ9H788 454 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 NRBP1Q9UHY1 535 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 TMEM110-MUSTN1A8MSY1 372 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 PI16Q6UXB8 463 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 TCHPQ9BT92 498 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
PTPRU-205ENST00000460170 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 DDAH1O94760 285 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 SIK1P57059 783 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 RESTQ13127 1097 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 RGS22Q8NE09 1264 aa16.49■□□□□ 0.23
PTPRU-205ENST00000460170 H7C1W4 665 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 KIF23Q02241 960 aaPredicted RBP16.48■□□□□ 0.23
PTPRU-205ENST00000460170 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
PTPRU-205ENST00000460170 EBAG9O00559 213 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 CDC25BP30305 580 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 OR8K1Q8NGG5 319 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 GIMAP7Q8NHV1 300 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 FAM76AQ8TAV0 307 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 NOX5Q96PH1 765 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
PTPRU-205ENST00000460170 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
PTPRU-205ENST00000460170 CCDC77Q9BR77 488 aa16.48■□□□□ 0.23
PTPRU-205ENST00000460170 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 SPATA1Q5VX52 437 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
PTPRU-205ENST00000460170 NLRP10Q86W26 655 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 TSPOAP1O95153 1857 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 DNAJC21Q5F1R6 531 aaKnown RBP16.47■□□□□ 0.23
PTPRU-205ENST00000460170 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 C11orf57Q6ZUT1 292 aaPredicted RBP16.47■□□□□ 0.23
PTPRU-205ENST00000460170 TULP4Q9NRJ4 1543 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 KCNJ18B7U540 433 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 GABPB1Q06547 395 aaPredicted RBP16.47■□□□□ 0.23
PTPRU-205ENST00000460170 KCNJ12Q14500 433 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
PTPRU-205ENST00000460170 SYNCQ9H7C4 482 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 PTGDRQ13258 359 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 ASIC2Q16515 512 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 PPP2R2CQ9Y2T4 447 aa16.47■□□□□ 0.23
PTPRU-205ENST00000460170 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 CHMP2AO43633 222 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 MORC3Q14149 939 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 DESI2Q9BSY9 194 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 DNM3Q9UQ16 869 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 CALUO43852 315 aaPredicted RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 INF2Q27J81 1249 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 STMN4Q9H169 189 aaPredicted RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 INCENPQ9NQS7 918 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 STK24Q9Y6E0 443 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 LRRIQ1Q96JM4 1722 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 ZEB2O60315 1214 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms