RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
HPS3-202ENST00000460120 NRDCO43847 1150 aa20.74■□□□□ 0.91
HPS3-202ENST00000460120 ADKP55263 362 aaKnown RBP20.74■□□□□ 0.91
HPS3-202ENST00000460120 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
HPS3-202ENST00000460120 SRBD1Q8N5C6 995 aaKnown RBP20.74■□□□□ 0.91
HPS3-202ENST00000460120 LRRN4CLQ8ND94 238 aa20.74■□□□□ 0.91
HPS3-202ENST00000460120 SYMPKQ92797 1274 aaKnown RBP20.74■□□□□ 0.91
HPS3-202ENST00000460120 USP17L8P0C7I0 530 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 TROAPQ12815 778 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 DCP1AQ9NPI6 582 aaPredicted RBP20.73■□□□□ 0.91
HPS3-202ENST00000460120 MCM9Q9NXL9 1143 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 ANAPC4Q9UJX5 808 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 CEP131Q9UPN4 1083 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 CBFA2T2O43439 604 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 ACTN4O43707 911 aaKnown RBP20.73■□□□□ 0.91
HPS3-202ENST00000460120 ZPR1O75312 459 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 PIK3AP1Q6ZUJ8 805 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 CREBRFQ8IUR6 639 aa20.73■□□□□ 0.91
HPS3-202ENST00000460120 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 FUT2Q10981 343 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 ELF2Q15723 593 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 CTCFLQ8NI51 663 aaPredicted RBP20.72■□□□□ 0.91
HPS3-202ENST00000460120 DYNLL2Q96FJ2 89 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 PHF20Q9BVI0 1012 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 BRIP1Q9BX63 1249 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 MCM7P33993 719 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 VSTM4Q8IW00 320 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 DNAI1Q9UI46 699 aa20.72■□□□□ 0.91
HPS3-202ENST00000460120 NLRP5P59047 1200 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 DZIP1Q86YF9 867 aaKnown RBP20.71■□□□□ 0.91
HPS3-202ENST00000460120 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
HPS3-202ENST00000460120 NGLY1Q96IV0 654 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 MED15Q96RN5 788 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 CRNKL1Q9BZJ0 848 aaKnown RBP20.71■□□□□ 0.91
HPS3-202ENST00000460120 BLZF1Q9H2G9 400 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 NID2Q14112 1375 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 CDC25AP30304 524 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 FBXO33Q7Z6M2 555 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 ANKIB1Q9P2G1 1089 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 MYH2Q9UKX2 1941 aa20.71■□□□□ 0.91
HPS3-202ENST00000460120 TMTC3Q6ZXV5 915 aa20.7■□□□□ 0.9
HPS3-202ENST00000460120 RASGRP4Q8TDF6 673 aa20.7■□□□□ 0.9
HPS3-202ENST00000460120 BCORQ6W2J9 1755 aa20.7■□□□□ 0.9
HPS3-202ENST00000460120 PRPF3O43395 683 aaKnown RBP20.7■□□□□ 0.9
HPS3-202ENST00000460120 PTGDRQ13258 359 aa20.7■□□□□ 0.9
HPS3-202ENST00000460120 DIXDC1Q155Q3 683 aa20.7■□□□□ 0.9
HPS3-202ENST00000460120 CPLX3Q8WVH0 158 aa20.7■□□□□ 0.9
HPS3-202ENST00000460120 MORC3Q14149 939 aa20.69■□□□□ 0.9
HPS3-202ENST00000460120 TTC38Q5R3I4 469 aa20.69■□□□□ 0.9
HPS3-202ENST00000460120 RGS22Q8NE09 1264 aa20.69■□□□□ 0.9
HPS3-202ENST00000460120 BRMS1Q9HCU9 246 aa20.69■□□□□ 0.9
HPS3-202ENST00000460120 IGSF3O75054 1194 aa20.69■□□□□ 0.9
HPS3-202ENST00000460120 CNTNAP5Q8WYK1 1306 aa20.68■□□□□ 0.9
HPS3-202ENST00000460120 CD44P16070 742 aaKnown RBP20.68■□□□□ 0.9
HPS3-202ENST00000460120 USP5P45974 858 aa20.68■□□□□ 0.9
HPS3-202ENST00000460120 GRIK5Q16478 980 aa20.68■□□□□ 0.9
HPS3-202ENST00000460120 SAP30BPQ9UHR5 308 aaKnown RBP20.68■□□□□ 0.9
HPS3-202ENST00000460120 SLC44A5Q8NCS7 719 aa20.68■□□□□ 0.9
HPS3-202ENST00000460120 PAGE5Q96GU1 130 aa20.68■□□□□ 0.9
HPS3-202ENST00000460120 DESI2Q9BSY9 194 aa20.68■□□□□ 0.9
HPS3-202ENST00000460120 RBM28Q9NW13 759 aaKnown RBP20.68■□□□□ 0.9
HPS3-202ENST00000460120 DUOX1Q9NRD9 1551 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 TFAP4Q01664 338 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 RASGRP2Q7LDG7 609 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 MLKLQ8NB16 471 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 WNK3Q9BYP7 1800 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 CACNA1SQ13698 1873 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 SLU7O95391 586 aaKnown RBP20.67■□□□□ 0.9
HPS3-202ENST00000460120 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
HPS3-202ENST00000460120 NPY5RQ15761 445 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 BARGINQ6ZT62 677 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 STAG2Q8N3U4 1231 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
HPS3-202ENST00000460120 MAPK8IP1Q9UQF2 711 aa20.67■□□□□ 0.9
HPS3-202ENST00000460120 USP17L3A6NCW0 530 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 USP17L4A6NCW7 530 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 TEX33O43247 280 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 TPTE2Q6XPS3 522 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 USP17L1Q7RTZ2 530 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 ZNF579Q8NAF0 562 aaKnown RBP20.66■□□□□ 0.9
HPS3-202ENST00000460120 MTA3Q9BTC8 594 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 CPVLQ9H3G5 476 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
HPS3-202ENST00000460120 ERCC6LQ2NKX8 1250 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 SH3RF3Q8TEJ3 882 aaPredicted RBP20.66■□□□□ 0.9
HPS3-202ENST00000460120 PLIN2Q99541 437 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 NARFQ9UHQ1 456 aa20.66■□□□□ 0.9
HPS3-202ENST00000460120 PSDA5PKW4 1024 aaPredicted RBP20.65■□□□□ 0.9
HPS3-202ENST00000460120 SCG2P13521 617 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 RCAN1P53805 252 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 NFIXQ14938 502 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 TOGARAM2Q6ZUX3 1019 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 ARHGEF1Q92888 912 aaKnown RBP20.65■□□□□ 0.9
HPS3-202ENST00000460120 DACH1Q9UI36 760 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 CALM1P0DP23 149 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 CALM2P0DP24 149 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 CALM3P0DP25 149 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 PLCD1P51178 756 aa20.65■□□□□ 0.9
HPS3-202ENST00000460120 BAG1Q99933 345 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms