RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 PTPDC1A2A3K4 754 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 ZBTB43O43298 467 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 DTNBO60941 627 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 IFNAR1P17181 557 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 GJB2P29033 226 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 STK3Q13188 491 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 RASA3Q14644 834 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 SART3Q15020 963 aaKnown RBP12.23□□□□□ -0.45
NEDD9-205ENST00000459670 CCDC178Q5BJE1 867 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 CLEC10AQ8IUN9 316 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 MKNK2Q9HBH9 465 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-205ENST00000459670 H7C1D1 291 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 MYO1BO43795 1136 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 RXRAP19793 462 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
NEDD9-205ENST00000459670 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEDD9-205ENST00000459670 CCT2P78371 535 aaKnown RBP12.22□□□□□ -0.45
NEDD9-205ENST00000459670 TNFAIP1Q13829 316 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 GRM4Q14833 912 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 GPR162Q16538 588 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 IFIT1BQ5T764 474 aaKnown RBP12.22□□□□□ -0.45
NEDD9-205ENST00000459670 RASGRP2Q7LDG7 609 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 APOBEC3FQ8IUX4 373 aaKnown RBP12.22□□□□□ -0.45
NEDD9-205ENST00000459670 MKL1Q969V6 931 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 VEZTQ9HBM0 779 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 ZNF112Q9UJU3 913 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
NEDD9-205ENST00000459670 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 SYT1P21579 422 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 ANGEL2Q5VTE6 544 aaKnown RBP12.21□□□□□ -0.45
NEDD9-205ENST00000459670 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 ZNF444Q8N0Y2 327 aaPredicted RBP12.21□□□□□ -0.45
NEDD9-205ENST00000459670 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 SYNPO2Q9UMS6 1093 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 MTMR6Q9Y217 621 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
NEDD9-205ENST00000459670 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.46
NEDD9-205ENST00000459670 ERICH2A1L162 156 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 PALM3A6NDB9 673 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-205ENST00000459670 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 PLEKHA8P1O95397 391 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 TOP1P11387 765 aaKnown RBP12.2□□□□□ -0.46
NEDD9-205ENST00000459670 TNNI2P48788 182 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
NEDD9-205ENST00000459670 FGD1P98174 961 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 RTN1Q16799 776 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 ZBTB21Q9ULJ3 1066 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 SCAF8Q9UPN6 1271 aaKnown RBP12.2□□□□□ -0.46
NEDD9-205ENST00000459670 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
NEDD9-205ENST00000459670 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
NEDD9-205ENST00000459670 UBE2Q2LH0YL09 131 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 FMNL1O95466 1100 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 CALM1P0DP23 149 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 CALM2P0DP24 149 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 CALM3P0DP25 149 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 PDHBP11177 359 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 CAP2P40123 477 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 PKN1Q16512 942 aa12.19□□□□□ -0.46
NEDD9-205ENST00000459670 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 NBPF12Q5TAG4 269 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 TAF1DQ9H5J8 278 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 DAXXQ9UER7 740 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-205ENST00000459670 A0A1W2PRG0 241 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 CYTH3O43739 400 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 STX6O43752 255 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 GDF11O95390 407 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 TTLL1O95922 423 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 EPHX2P34913 555 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 NUCB2P80303 420 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 SEPT2Q15019 361 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 CDC37L1Q7L3B6 337 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 CATIPQ7Z7H3 387 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
NEDD9-205ENST00000459670 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 SRBD1Q8N5C6 995 aaKnown RBP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 TNPO1Q92973 898 aaKnown RBP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 RNF26Q9BY78 433 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.18□□□□□ -0.46
NEDD9-205ENST00000459670 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms