RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 IGF2BP3O00425 579 aaKnown RBP eCLIP21.55■■□□□ 1.04
TRIM13-206ENST00000457662 TSPY3P0CV98 308 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 TSPY8P0CW00 308 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 NT5C2P49902 561 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 TFAP4Q01664 338 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 MOGSQ13724 837 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 NEDD1Q8NHV4 660 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.55■■□□□ 1.04
TRIM13-206ENST00000457662 NBPF3Q9H094 633 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 ZCCHC17Q9NP64 241 aaKnown RBP21.55■■□□□ 1.04
TRIM13-206ENST00000457662 TOMM22Q9NS69 142 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 SAGE1Q9NXZ1 904 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 TACC3Q9Y6A5 838 aa21.55■■□□□ 1.04
TRIM13-206ENST00000457662 BTBD19C9JJ37 291 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 RANBP6O60518 1105 aaKnown RBP21.54■■□□□ 1.04
TRIM13-206ENST00000457662 TRPA1O75762 1119 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 HMGCS2P54868 508 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 ICA1Q05084 483 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 MTMR2Q13614 643 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 GADL1Q6ZQY3 521 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 ANKRD23Q86SG2 305 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 PROCA1Q8NCQ7 364 aaPredicted RBP21.54■■□□□ 1.04
TRIM13-206ENST00000457662 FEZ1Q99689 392 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 KIAA1683Q9H0B3 1180 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 ARHGEF10LQ9HCE6 1279 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 TMOD4Q9NZQ9 345 aa21.54■■□□□ 1.04
TRIM13-206ENST00000457662 RBM8AQ9Y5S9 174 aaKnown RBP21.54■■□□□ 1.04
TRIM13-206ENST00000457662 TSPY2A6NKD2 308 aa21.53■■□□□ 1.04
TRIM13-206ENST00000457662 HSPA1AP0DMV8 641 aaKnown RBP21.53■■□□□ 1.04
TRIM13-206ENST00000457662 HSPA1BP0DMV9 641 aaKnown RBP21.53■■□□□ 1.04
TRIM13-206ENST00000457662 USP14P54578 494 aa21.53■■□□□ 1.04
TRIM13-206ENST00000457662 FAM47AQ5JRC9 791 aa21.53■■□□□ 1.04
TRIM13-206ENST00000457662 RRP12Q5JTH9 1297 aaKnown RBP21.53■■□□□ 1.04
TRIM13-206ENST00000457662 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
TRIM13-206ENST00000457662 TBC1D10CQ8IV04 446 aa21.53■■□□□ 1.04
TRIM13-206ENST00000457662 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
TRIM13-206ENST00000457662 PPP4R3BQ5MIZ7 849 aa21.52■■□□□ 1.04
TRIM13-206ENST00000457662 SIAH1Q8IUQ4 282 aa21.52■■□□□ 1.04
TRIM13-206ENST00000457662 FAM43AQ8N2R8 423 aa21.52■■□□□ 1.04
TRIM13-206ENST00000457662 SH2D4AQ9H788 454 aa21.52■■□□□ 1.04
TRIM13-206ENST00000457662 NYAP2Q9P242 653 aa21.52■■□□□ 1.04
TRIM13-206ENST00000457662 IGKV6D-41A0A0C4DH26 115 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 CYP21A2P08686 494 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 EEF2P13639 858 aaKnown RBP21.52■■□□□ 1.03
TRIM13-206ENST00000457662 GPAT2Q6NUI2 795 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 ESR2Q92731 530 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 CNNM2Q9H8M5 875 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 MTMR4Q9NYA4 1195 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 AGTPBP1Q9UPW5 1226 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 SLC45A1Q9Y2W3 748 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 TMX2Q9Y320 296 aa21.52■■□□□ 1.03
TRIM13-206ENST00000457662 PLIN4Q96Q06 1357 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 A0A1W2PRG0 241 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 REC8O95072 547 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 ATP2B2Q01814 1243 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 C12orf42Q96LP6 360 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 CFHR5Q9BXR6 569 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 KRT23Q9C075 422 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 EMILIN3Q9NT22 766 aa21.51■■□□□ 1.03
TRIM13-206ENST00000457662 PTPRFP10586 1907 aa21.5■■□□□ 1.03
TRIM13-206ENST00000457662 PDHXO00330 501 aa21.5■■□□□ 1.03
TRIM13-206ENST00000457662 PABPC4Q13310 644 aaKnown RBP eCLIP21.5■■□□□ 1.03
TRIM13-206ENST00000457662 NECTIN1Q15223 517 aa21.5■■□□□ 1.03
TRIM13-206ENST00000457662 CLEC10AQ8IUN9 316 aa21.5■■□□□ 1.03
TRIM13-206ENST00000457662 CEP95Q96GE4 821 aa21.5■■□□□ 1.03
TRIM13-206ENST00000457662 LAMA4Q16363 1823 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 PCNTO95613 3336 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 TTLL1O95922 423 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 TRDNQ13061 729 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 TAF1CQ15572 869 aaPredicted RBP21.49■■□□□ 1.03
TRIM13-206ENST00000457662 ZYXQ15942 572 aaKnown RBP21.49■■□□□ 1.03
TRIM13-206ENST00000457662 MKL1Q969V6 931 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 ZFYVE28Q9HCC9 887 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 TCP11L1Q9NUJ3 509 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 CLIP2Q9UDT6 1046 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 NEDD4P46934 1319 aa21.49■■□□□ 1.03
TRIM13-206ENST00000457662 GREB1LQ9C091 1923 aaPredicted RBP21.48■■□□□ 1.03
TRIM13-206ENST00000457662 FOXN1O15353 648 aa21.48■■□□□ 1.03
TRIM13-206ENST00000457662 CTCFP49711 727 aaPredicted RBP21.48■■□□□ 1.03
TRIM13-206ENST00000457662 RNF20Q5VTR2 975 aa21.48■■□□□ 1.03
TRIM13-206ENST00000457662 IL17RBQ9NRM6 502 aa21.48■■□□□ 1.03
TRIM13-206ENST00000457662 SYNPO2Q9UMS6 1093 aa21.48■■□□□ 1.03
TRIM13-206ENST00000457662 TBC1D8O95759 1140 aa21.47■■□□□ 1.03
TRIM13-206ENST00000457662 HOXA7P31268 230 aaPredicted RBP21.47■■□□□ 1.03
TRIM13-206ENST00000457662 DGKZQ13574 1117 aa21.47■■□□□ 1.03
TRIM13-206ENST00000457662 TREML2Q5T2D2 321 aa21.47■■□□□ 1.03
TRIM13-206ENST00000457662 CREB3L3Q68CJ9 461 aa21.47■■□□□ 1.03
TRIM13-206ENST00000457662 LPAR1Q92633 364 aa21.47■■□□□ 1.03
TRIM13-206ENST00000457662 VCPKMTQ9H867 229 aa21.47■■□□□ 1.03
TRIM13-206ENST00000457662 B4E1Z4 1266 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 E7EWF7 191 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 SLC27A2O14975 620 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 EPB41L2O43491 1005 aaKnown RBP21.46■■□□□ 1.03
TRIM13-206ENST00000457662 KDM4AO75164 1064 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 CRHR2Q13324 411 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 CCDC178Q5BJE1 867 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 GOPCQ9HD26 462 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 ZSWIM5Q9P217 1185 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 PNMA3Q9UL41 463 aa21.46■■□□□ 1.03
TRIM13-206ENST00000457662 EIF5BO60841 1220 aaKnown RBP21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms