RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 FGAP02671 866 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 SERPINB2P05120 415 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 EVCP57679 992 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 GSDMDP57764 484 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 TOB2Q14106 344 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 BRD3Q15059 726 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 FOXD4L6Q3SYB3 417 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 ANO6Q4KMQ2 910 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 FOXD4L3Q6VB84 417 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 VPS37DQ86XT2 251 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 CCDC83Q8IWF9 413 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 MAGEB6Q8N7X4 407 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 ZNF483Q8TF39 744 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 FAM84BQ96KN1 310 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 NUP62CLQ9H1M0 184 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 SLC24A3Q9HC58 644 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 TNS1Q9HBL0 1735 aaKnown RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 CCDC151A5D8V7 595 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 E7EWF7 191 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 IMMTQ16891 758 aaKnown RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 LONRF2Q1L5Z9 754 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 WLSQ5T9L3 541 aa8.68□□□□□ -1.02
HDAC9-218ENST00000456174 E4F1Q66K89 784 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 RSRC2Q7L4I2 434 aaKnown RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 CTCFLQ8NI51 663 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 HNRNPLLQ8WVV9 542 aaKnown RBP8.68□□□□□ -1.02
HDAC9-218ENST00000456174 ANKRD65E5RJM6 399 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 CAPN15O75808 1086 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 F13A1P00488 732 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 ETF1P62495 437 aaKnown RBP8.67□□□□□ -1.02
HDAC9-218ENST00000456174 GRAPQ13588 217 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 CHD4Q14839 1912 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 ZNF827Q17R98 1081 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 WWC2Q6AWC2 1192 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 Q6ZUG5 572 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 NECAB1Q8N987 351 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 GRAPLQ8TC17 118 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-218ENST00000456174 RABGGTAQ92696 567 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 N4BP2L2Q92802 583 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-218ENST00000456174 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 ATXN2Q99700 1313 aaKnown RBP8.67□□□□□ -1.02
HDAC9-218ENST00000456174 OSBPL5Q9H0X9 879 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-218ENST00000456174 LRP2BPQ9P2M1 347 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 SMC3Q9UQE7 1217 aa8.67□□□□□ -1.02
HDAC9-218ENST00000456174 CHUKO15111 745 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 FIBPO43427 364 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 MYBL2P10244 700 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 NF2P35240 595 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 RBM5P52756 815 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 HAND2P61296 217 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 DHX8Q14562 1220 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 FBXO33Q7Z6M2 555 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 FAM71BQ8TC56 605 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 RPGRQ92834 1020 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 AKT1S1Q96B36 256 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 CABS1Q96KC9 395 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 JPH2Q9BR39 696 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 DENND2AQ9ULE3 1009 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 COL1A1P02452 1464 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 POLRMTO00411 1230 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 CCP110O43303 1012 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 KLRK1P26718 216 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 CCNHP51946 323 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ST3GAL1Q11201 340 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 SLC5A9Q2M3M2 681 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ZKSCAN4Q969J2 545 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 STRBPQ96SI9 672 aaKnown RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 LRRC2Q9BYS8 371 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ABCF2Q9UG63 623 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-218ENST00000456174 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ANKRD31Q8N7Z5 1873 aa8.66□□□□□ -1.02
HDAC9-218ENST00000456174 ZNF213O14771 459 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 MBD4O95243 580 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 GJB2P29033 226 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 HIBADHP31937 336 aaKnown RBP8.65□□□□□ -1.02
HDAC9-218ENST00000456174 LIG3P49916 1009 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 CRY2Q49AN0 593 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 C1QTNF12Q5T7M4 302 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 FBXW10Q5XX13 1052 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-218ENST00000456174 KLHL23Q8NBE8 558 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 CARD6Q9BX69 1037 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 PDE11AQ9HCR9 933 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 SPATS2LQ9NUQ6 558 aaKnown RBP8.65□□□□□ -1.02
HDAC9-218ENST00000456174 IMPACTQ9P2X3 320 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 FAN1Q9Y2M0 1017 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 CACNA1SQ13698 1873 aa8.65□□□□□ -1.02
HDAC9-218ENST00000456174 SEMA3EO15041 775 aa8.65□□□□□ -1.03
HDAC9-218ENST00000456174 STX6O43752 255 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms