RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 LRMPQ12912 555 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 AOC3Q16853 763 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 SLFNL1Q499Z3 407 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 RESP18Q5W5W9 173 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 KRT40Q6A162 431 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 KANK3Q6NY19 840 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 CCDC144CPQ8IYA2 1237 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 TRIML1Q8N9V2 468 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 IGDCC4Q8TDY8 1250 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 FTOQ9C0B1 505 aaKnown RBP eCLIP12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 NAPBQ9H115 298 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 NRBP1Q9UHY1 535 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 CEP131Q9UPN4 1083 aa12.16□□□□□ -0.46
GTF3C2-206ENST00000454704 MYH13Q9UKX3 1938 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 LAMB1P07942 1786 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 ERICH2A1L162 156 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 ZBTB22O15209 634 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 IDH1O75874 414 aaKnown RBP12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 FOSBP53539 338 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 GRM1Q13255 1194 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 PTPAQ15257 358 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 NTRK3Q16288 839 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 RILPL1Q5EBL4 403 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 SPATA5Q8NB90 893 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 KIF18AQ8NI77 898 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 C16orf45Q96MC5 204 aaPredicted RBP12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
GTF3C2-206ENST00000454704 BMP15O95972 392 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 APPP05067 770 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 POLR3DP05423 398 aaPredicted RBP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 MYL5Q02045 173 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 IFNL3Q8IZI9 196 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 CCAR2Q8N163 923 aaKnown RBP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
GTF3C2-206ENST00000454704 GOLGA6L9A6NEM1 432 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 KIF28PB7ZC32 967 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 DEXIO95424 95 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 XBP1P17861 261 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 DPCR1Q3MIW9 517 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 CCDC152Q4G0S7 254 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 CST9Q5W186 159 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
GTF3C2-206ENST00000454704 B4E1Z4 1266 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 IFIT3O14879 490 aaKnown RBP12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 IGHMBP2P38935 993 aaKnown RBP12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 PHKA1P46020 1223 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 NCAPHQ15003 741 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 UTP14CQ5TAP6 766 aaKnown RBP12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 CYP4F22Q6NT55 531 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 TAF1P21675 1872 aa12.12□□□□□ -0.47
GTF3C2-206ENST00000454704 SMC2O95347 1197 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 MMP1P03956 469 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 ECE1P42892 770 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 FAM193AP78312 1265 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 FANCCQ00597 558 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 CXCL9Q07325 125 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 WTAPQ15007 396 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 RTN1Q16799 776 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 KRBA2Q6ZNG9 492 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 FILIP1Q7Z7B0 1213 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms