RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 PCDHGC4Q9Y5F7 938 aa8.49□□□□□ -1.05
CSTF1-204ENST00000452950 DNAJC25-GNG10A0A024R161 153 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 AGRPO00253 132 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 HTR3BO95264 441 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 NEK2P51955 445 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 HSPA2P54652 639 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 SNRPNP63162 240 aaKnown RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 PTPN11Q06124 597 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 LAMC2Q13753 1193 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 SAFB2Q14151 953 aaKnown RBP eCLIP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 SUZ12Q15022 739 aaKnown RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 PPP4R4Q6NUP7 873 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 KIAA1211LQ6NV74 962 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 CNNM4Q6P4Q7 775 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 UNC5AQ6ZN44 842 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 LRRTM3Q86VH5 581 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 EXOC2Q96KP1 924 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 IPO9Q96P70 1041 aaKnown RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 MPHOSPH6Q99547 160 aaKnown RBP8.48□□□□□ -1.05
CSTF1-204ENST00000452950 CDC6Q99741 560 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 ARNT2Q9HBZ2 717 aa8.48□□□□□ -1.05
CSTF1-204ENST00000452950 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 CCNFP41002 786 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 RAB27AP51159 221 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 ATP11AP98196 1134 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 ZNF252P-AS1Q0IIN9 211 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 SPEM2Q0P670 501 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 BRD3Q15059 726 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 ZYXQ15942 572 aaKnown RBP8.47□□□□□ -1.05
CSTF1-204ENST00000452950 FOXB2Q5VYV0 432 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 DDX46Q7L014 1031 aaKnown RBP8.47□□□□□ -1.05
CSTF1-204ENST00000452950 NECAB2Q7Z6G3 386 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 CHPFQ8IZ52 775 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 SAMD3Q8N6K7 520 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 GOLGA6L1Q8N7Z2 621 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 BHMTQ93088 406 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 EVI5LQ96CN4 794 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 DHRS4Q9BTZ2 278 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 INTS7Q9NVH2 962 aaKnown RBP8.47□□□□□ -1.05
CSTF1-204ENST00000452950 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 GMIPQ9P107 970 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 PCDHB10Q9UN67 800 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 MRPS23Q9Y3D9 190 aaKnown RBP8.47□□□□□ -1.05
CSTF1-204ENST00000452950 PRR36Q9H6K5 1346 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
CSTF1-204ENST00000452950 CUL7Q14999 1698 aa8.46□□□□□ -1.05
CSTF1-204ENST00000452950 CUX1P39880 1505 aa8.46□□□□□ -1.05
CSTF1-204ENST00000452950 LOC102724428A0A0B4J2F2 783 aa8.46□□□□□ -1.06
CSTF1-204ENST00000452950 IGHA1P01876 353 aa8.46□□□□□ -1.06
CSTF1-204ENST00000452950 ARAFP10398 606 aa8.46□□□□□ -1.06
CSTF1-204ENST00000452950 SIK1P57059 783 aa8.46□□□□□ -1.06
CSTF1-204ENST00000452950 INTS3Q68E01 1043 aaKnown RBP8.46□□□□□ -1.06
CSTF1-204ENST00000452950 OVOS1Q6IE37 1185 aa8.46□□□□□ -1.06
CSTF1-204ENST00000452950 GGA1Q9UJY5 639 aa8.46□□□□□ -1.06
CSTF1-204ENST00000452950 TEX14Q8IWB6 1497 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 AKAP10O43572 662 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 PPFIA4O75335 1185 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
CSTF1-204ENST00000452950 EYA4O95677 639 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 LDHAP00338 332 aaKnown RBP8.45□□□□□ -1.06
CSTF1-204ENST00000452950 GHRHP01286 108 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 ACRP10323 421 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 NME1P15531 152 aaKnown RBP8.45□□□□□ -1.06
CSTF1-204ENST00000452950 GPLD1P80108 840 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 SLC7A5Q01650 507 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 SYCP2LQ5T4T6 812 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 ADAMTSL4Q6UY14 1074 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 C14orf80Q86SX3 495 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 PPM1KQ8N3J5 372 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
CSTF1-204ENST00000452950 SMAD5Q99717 465 aaKnown RBP8.45□□□□□ -1.06
CSTF1-204ENST00000452950 MRPL4Q9BYD3 311 aaKnown RBP8.45□□□□□ -1.06
CSTF1-204ENST00000452950 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 HCN2Q9UL51 889 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
CSTF1-204ENST00000452950 TRAV20A0A0B4J274 112 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 J3QW42 95 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 SH3BP5O60239 455 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 MAPTP10636 758 aaKnown RBP8.44□□□□□ -1.06
CSTF1-204ENST00000452950 PAX3P23760 479 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 TNP2Q05952 138 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 MAP7Q14244 749 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 FAM209AQ5JX71 171 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 MAP1SQ66K74 1059 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-204ENST00000452950 RAB44Q7Z6P3 723 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-204ENST00000452950 STRA8Q7Z7C7 330 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 DDX54Q8TDD1 881 aaKnown RBP8.44□□□□□ -1.06
CSTF1-204ENST00000452950 KLHL6Q8WZ60 621 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 ATG4CQ96DT6 458 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 MTMR8Q96EF0 704 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 STRN4Q9NRL3 753 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 SLC5A4Q9NY91 659 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 MARK1Q9P0L2 795 aa8.44□□□□□ -1.06
CSTF1-204ENST00000452950 PLB1Q6P1J6 1458 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms