RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 ADD2P35612 726 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 CUL4AQ13619 759 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
CDK3-202ENST00000448471 TMX3Q96JJ7 454 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 JAKMIP1Q96N16 626 aaKnown RBP17.25■□□□□ 0.35
CDK3-202ENST00000448471 IDI2Q9BXS1 227 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 CYP46A1Q9Y6A2 500 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
CDK3-202ENST00000448471 MYH7P12883 1935 aa17.24■□□□□ 0.35
CDK3-202ENST00000448471 ENTPD3O75355 529 aa17.24■□□□□ 0.35
CDK3-202ENST00000448471 CASTP20810 708 aaKnown RBP17.24■□□□□ 0.35
CDK3-202ENST00000448471 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
CDK3-202ENST00000448471 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
CDK3-202ENST00000448471 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
CDK3-202ENST00000448471 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
CDK3-202ENST00000448471 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
CDK3-202ENST00000448471 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
CDK3-202ENST00000448471 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
CDK3-202ENST00000448471 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
CDK3-202ENST00000448471 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 COA7Q96BR5 231 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
CDK3-202ENST00000448471 TRIM75PA6NK02 468 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 M0R2C6 588 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 SLC9C2Q5TAH2 1124 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 NECAB2Q7Z6G3 386 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 ANKRD13CQ8N6S4 541 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 DIS3LQ8TF46 1054 aaKnown RBP17.23■□□□□ 0.35
CDK3-202ENST00000448471 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.23■□□□□ 0.356e-7■□□□□ 8.4
CDK3-202ENST00000448471 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
CDK3-202ENST00000448471 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
CDK3-202ENST00000448471 SEMA3EO15041 775 aa17.22■□□□□ 0.35
CDK3-202ENST00000448471 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
CDK3-202ENST00000448471 MAP3K10Q02779 954 aa17.22■□□□□ 0.35
CDK3-202ENST00000448471 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
CDK3-202ENST00000448471 NBR1Q14596 966 aa17.22■□□□□ 0.35
CDK3-202ENST00000448471 CCDC84Q86UT8 332 aaPredicted RBP17.22■□□□□ 0.35
CDK3-202ENST00000448471 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.22■□□□□ 0.35
CDK3-202ENST00000448471 LIMCH1Q9UPQ0 1083 aa17.22■□□□□ 0.35
CDK3-202ENST00000448471 GAKO14976 1311 aa17.22■□□□□ 0.35
CDK3-202ENST00000448471 IDH1O75874 414 aaKnown RBP17.21■□□□□ 0.35
CDK3-202ENST00000448471 PDE6AP16499 860 aa17.21■□□□□ 0.35
CDK3-202ENST00000448471 PICALMQ13492 652 aa17.21■□□□□ 0.35
CDK3-202ENST00000448471 GDF15Q99988 308 aa17.21■□□□□ 0.35
CDK3-202ENST00000448471 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
CDK3-202ENST00000448471 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
CDK3-202ENST00000448471 DOCK1Q14185 1865 aa17.21■□□□□ 0.35
CDK3-202ENST00000448471 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.35
CDK3-202ENST00000448471 TCRBV5S4A2TA0A5A2 114 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 CYP21A2P08686 494 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 AK2P54819 239 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 FAM110CQ1W6H9 321 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 TREML2Q5T2D2 321 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 BLOC1S2Q6QNY1 142 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
CDK3-202ENST00000448471 PUS7LQ9H0K6 701 aaKnown RBP17.2■□□□□ 0.34
CDK3-202ENST00000448471 DDX4Q9NQI0 724 aaKnown RBP17.2■□□□□ 0.34
CDK3-202ENST00000448471 PNMA3Q9UL41 463 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 PTPRFP10586 1907 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
CDK3-202ENST00000448471 GPAA1O43292 621 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 BMP8BP34820 402 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
CDK3-202ENST00000448471 ANKLE1Q8NAG6 615 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
CDK3-202ENST00000448471 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 ZMYND8Q9ULU4 1186 aaPredicted RBP17.19■□□□□ 0.34
CDK3-202ENST00000448471 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
CDK3-202ENST00000448471 BTDP43251 543 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 NUCB2P80303 420 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 ANKRD1Q15327 319 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
CDK3-202ENST00000448471 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
CDK3-202ENST00000448471 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
CDK3-202ENST00000448471 FOXP2O15409 715 aa17.18■□□□□ 0.34
CDK3-202ENST00000448471 HMGCRP04035 888 aa17.18■□□□□ 0.34
CDK3-202ENST00000448471 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
CDK3-202ENST00000448471 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
CDK3-202ENST00000448471 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
CDK3-202ENST00000448471 TAF6LQ9Y6J9 622 aa17.18■□□□□ 0.34
CDK3-202ENST00000448471 IGSF3O75054 1194 aa17.17■□□□□ 0.34
CDK3-202ENST00000448471 CPA1P15085 419 aa17.17■□□□□ 0.34
CDK3-202ENST00000448471 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
CDK3-202ENST00000448471 GPR153Q6NV75 609 aa17.17■□□□□ 0.34
CDK3-202ENST00000448471 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
CDK3-202ENST00000448471 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
CDK3-202ENST00000448471 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
CDK3-202ENST00000448471 LAMA3Q16787 3333 aa17.17■□□□□ 0.34
CDK3-202ENST00000448471 FAM196BA6NMK8 535 aa17.16■□□□□ 0.34
CDK3-202ENST00000448471 TRIM32Q13049 653 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms