RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 SP3Q02447 781 aa16.86■□□□□ 0.29
SREBF1-207ENST00000447641 NAPBQ9H115 298 aa16.86■□□□□ 0.29
SREBF1-207ENST00000447641 IL25Q9H293 177 aa16.86■□□□□ 0.29
SREBF1-207ENST00000447641 ZMYM6O95789 1325 aa16.86■□□□□ 0.29
SREBF1-207ENST00000447641 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 A0A0G2JLL6 359 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-207ENST00000447641 GDF11O95390 407 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 GH2P01242 217 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 FGAP02671 866 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 CCL15Q16663 113 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 ABCB5Q2M3G0 1257 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 PRRT2Q7Z6L0 340 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-207ENST00000447641 CCDC84Q86UT8 332 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-207ENST00000447641 ZNF280CQ8ND82 737 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 PTCH2Q9Y6C5 1203 aa16.85■□□□□ 0.29
SREBF1-207ENST00000447641 MINDY4BA8MYZ0 360 aa16.84■□□□□ 0.29
SREBF1-207ENST00000447641 ZCCHC17Q9NP64 241 aaKnown RBP16.84■□□□□ 0.29
SREBF1-207ENST00000447641 BTBD19C9JJ37 291 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 FGRP09769 529 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 PPARAQ07869 468 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 SPP2Q13103 211 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 SH3D19Q5HYK7 790 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 GPAT2Q6NUI2 795 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 RAD50Q92878 1312 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.28
SREBF1-207ENST00000447641 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-207ENST00000447641 COLQQ9Y215 455 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-207ENST00000447641 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 AKR1B1P15121 316 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 RASA1P20936 1047 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 OTUD7BQ6GQQ9 843 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 TMEM179Q6ZVK1 233 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 FASTKD5Q7L8L6 764 aaKnown RBP16.82■□□□□ 0.28
SREBF1-207ENST00000447641 ANKRD23Q86SG2 305 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 SIAH1Q8IUQ4 282 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.82■□□□□ 0.28
SREBF1-207ENST00000447641 ARHGAP39Q9C0H5 1083 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 AS3MTQ9HBK9 375 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 CABP5Q9NP86 173 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 TACC3Q9Y6A5 838 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
SREBF1-207ENST00000447641 SGSM2O43147 1006 aa16.81■□□□□ 0.28
SREBF1-207ENST00000447641 BACE1P56817 501 aa16.81■□□□□ 0.28
SREBF1-207ENST00000447641 SEPT2Q15019 361 aa16.81■□□□□ 0.28
SREBF1-207ENST00000447641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.81■□□□□ 0.28
SREBF1-207ENST00000447641 MGAMO43451 1857 aa16.81■□□□□ 0.28
SREBF1-207ENST00000447641 C19orf81C9J6K1 198 aa16.8■□□□□ 0.28
SREBF1-207ENST00000447641 USP17L10C9JJH3 530 aa16.8■□□□□ 0.28
SREBF1-207ENST00000447641 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-207ENST00000447641 PROCA1Q8NCQ7 364 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-207ENST00000447641 NBPF3Q9H094 633 aa16.8■□□□□ 0.28
SREBF1-207ENST00000447641 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
SREBF1-207ENST00000447641 SLC45A1Q9Y2W3 748 aa16.8■□□□□ 0.28
SREBF1-207ENST00000447641 SLC3A2P08195 630 aaKnown RBP16.79■□□□□ 0.28
SREBF1-207ENST00000447641 CTDSPL2Q05D32 466 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 PDE4BQ07343 736 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 SLC9C1Q4G0N8 1177 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 ACER1Q8TDN7 264 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 SHISA4Q96DD7 197 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 KIAA1683Q9H0B3 1180 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
SREBF1-207ENST00000447641 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 A0A1W2PRG0 241 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 PDHXO00330 501 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
SREBF1-207ENST00000447641 ORC4O43929 436 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 CTGFP29279 349 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 HMGCS2P54868 508 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 PTH1RQ03431 593 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 MTMR2Q13614 643 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 STK11IPQ8N1F8 1099 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 SH3TC2Q8TF17 1288 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 C12orf42Q96LP6 360 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 KANSL2Q9H9L4 492 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
SREBF1-207ENST00000447641 ALPK3Q96L96 1907 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 PRDM1O75626 825 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 MYCP01106 439 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-207ENST00000447641 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-207ENST00000447641 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 ESYT1Q9BSJ8 1104 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.28
SREBF1-207ENST00000447641 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.27
SREBF1-207ENST00000447641 ADGRA2Q96PE1 1338 aa16.76■□□□□ 0.27
SREBF1-207ENST00000447641 H0YGN5 161 aa16.76■□□□□ 0.27
SREBF1-207ENST00000447641 PCP11498 1178 aaKnown RBP16.76■□□□□ 0.27
SREBF1-207ENST00000447641 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-207ENST00000447641 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms