RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 ST7Q9NRC1 585 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 MAPK8IP1Q9UQF2 711 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 FAM86C2PA6NEL3 165 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 C1QTNF9BB2RNN3 333 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 DDAH1O94760 285 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 GJB6O95452 261 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 RASA3Q14644 834 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 NCAPHQ15003 741 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 PAOXQ6QHF9 649 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 BAHD1Q8TBE0 780 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 MICAL1Q8TDZ2 1067 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 XAGE3Q8WTP9 111 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 PSMG3-AS1Q96PY0 264 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 DEPDC7Q96QD5 511 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 SNTG2Q9NY99 539 aa6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 ZNF214Q9UL59 606 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P16-201ENST00000447155 DYNC1LI2O43237 492 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 GATA4P43694 442 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 PMS1P54277 932 aaKnown RBP6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 CHMP4BP1P59074 171 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 BBS9Q3SYG4 887 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 ZNF746Q6NUN9 644 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 LETMD1Q6P1Q0 360 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 VHLLQ6RSH7 139 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 C6orf15Q6UXA7 325 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 BEND4Q6ZU67 534 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 CLEC10AQ8IUN9 316 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 PPP1R13LQ8WUF5 828 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 SLC6A18Q96N87 628 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 MIPEPQ99797 713 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 KCNF1Q9H3M0 494 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 CEP131Q9UPN4 1083 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 CCDC180Q9P1Z9 1646 aa6.53□□□□□ -1.36
HMGB1P16-201ENST00000447155 CCDC85CA6NKD9 419 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 PDPK1O15530 556 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 CLEC3AO75596 197 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 SLC7A5Q01650 507 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 KCNMA1Q12791 1236 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 NFKBIBQ15653 356 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 GNPTABQ3T906 1256 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 TMEM192Q8IY95 271 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 DNAJB8Q8NHS0 232 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 GIMAP7Q8NHV1 300 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 FAM83CQ9BQN1 747 aa6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
HMGB1P16-201ENST00000447155 FAM221BA6H8Z2 402 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 B2RBV5 119 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 SMARCA5O60264 1052 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 ETV3P41162 512 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 CDK5R2Q13319 367 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 SMARCC1Q92922 1105 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 RAXQ9Y2V3 346 aa6.51□□□□□ -1.37
HMGB1P16-201ENST00000447155 TLDC2A0PJX2 215 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 SLITRK5O94991 958 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 RNF4P78317 190 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 RASSF7Q02833 373 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 MRM1Q6IN84 353 aaKnown RBP6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 KIAA1211LQ6NV74 962 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 EEPD1Q7L9B9 569 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 PPFIBP1Q86W92 1011 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 TOP6BLQ8N6T0 577 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 KLHL6Q8WZ60 621 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 DUSP23Q9BVJ7 150 aa6.5□□□□□ -1.37
HMGB1P16-201ENST00000447155 COL17A1Q9UMD9 1497 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 CYP7A1P22680 504 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 NBPF12Q5TAG4 269 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 ST13P5Q8NFI4 369 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 RIN3Q8TB24 985 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 RNF141Q8WVD5 230 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 TP53INP1Q96A56 240 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 ZNF669Q96BR6 464 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 KREMEN1Q96MU8 473 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 C7orf69Q9H7B7 122 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 STOML1Q9UBI4 398 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 TBX22Q9Y458 520 aa6.49□□□□□ -1.37
HMGB1P16-201ENST00000447155 CADPSQ9ULU8 1353 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 C9IYK1 514 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 EOMESO95936 686 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 NAT2P11245 290 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 MTERF2Q49AM1 385 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 PRR23CQ6ZRP0 262 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 ZAR1Q86SH2 424 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 GATA6Q92908 595 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 VWCEQ96DN2 955 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 COX4I2Q96KJ9 171 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 FBXL18Q96ME1 805 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 ASPNQ9BXN1 380 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms