RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 SYCE1Q8N0S2 351 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
BRPF3-203ENST00000441123 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
BRPF3-203ENST00000441123 NF2P35240 595 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 SLC39A14Q15043 492 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 IFT81Q8WYA0 676 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 EXOC7Q9UPT5 735 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 EFCAB8A8MWE9 144 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 NSUN7Q8NE18 718 aaKnown RBP14.38□□□□□ -0.11
BRPF3-203ENST00000441123 PI4K2BQ8TCG2 481 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 LRRC7Q96NW7 1537 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 DKC1O60832 514 aaKnown RBP eCLIP14.38□□□□□ -0.11
BRPF3-203ENST00000441123 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 SNX29Q8TEQ0 813 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 TRERF1Q96PN7 1200 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
BRPF3-203ENST00000441123 TXKP42681 527 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 DCAF17Q5H9S7 520 aaPredicted RBP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 LRRC45Q96CN5 670 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 SEC62Q99442 399 aaKnown RBP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 U2AF2P26368 475 aaKnown RBP eCLIP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 LONP1P36776 959 aaKnown RBP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 CLEC17AQ6ZS10 378 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 BLIDQ8IZY5 108 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 OTUD6BQ8N6M0 293 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 HOMER2Q9NSB8 354 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 VPS54Q9P1Q0 977 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 LRRIQ1Q96JM4 1722 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 H7C1D1 291 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 LAD1O00515 517 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 SPATA1Q5VX52 437 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 RCOR1Q9UKL0 485 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 FMNL1O95466 1100 aaPredicted RBP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 TTLL7Q6ZT98 887 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 TSNARE1Q96NA8 513 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 TULP4Q9NRJ4 1543 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 TNFAIP3P21580 790 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 ERCC5P28715 1186 aaPredicted RBP14.37□□□□□ -0.11
BRPF3-203ENST00000441123 C8orf37Q96NL8 207 aa14.37□□□□□ -0.11
BRPF3-203ENST00000441123 KCNJ18B7U540 433 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 ACTN4O43707 911 aaKnown RBP14.36□□□□□ -0.11
BRPF3-203ENST00000441123 PRDM1O75626 825 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 NDUFA8P51970 172 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 KCNJ12Q14500 433 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 LRRC24Q50LG9 513 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 REXO1Q8N1G1 1221 aaKnown RBP14.36□□□□□ -0.11
BRPF3-203ENST00000441123 CSRNP2Q9H175 543 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 CUEDC2Q9H467 287 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 CAMSAP1Q5T5Y3 1602 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 STX10O60499 249 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 PDE8BO95263 885 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 CYP21A2P08686 494 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 MNAT1P51948 309 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 MORC3Q14149 939 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 ATP8A2Q9NTI2 1148 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 DNM2P50570 870 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 TFAP4Q01664 338 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 PPP2R2CQ9Y2T4 447 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 CEP83Q9Y592 693 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 NDC80O14777 642 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 PAK2Q13177 524 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 CFAP221Q4G0U5 840 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 SFMBT2Q5VUG0 894 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 GSTA5Q7RTV2 222 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 OR8K1Q8NGG5 319 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 IQCGQ9H095 443 aaKnown RBP14.36□□□□□ -0.11
BRPF3-203ENST00000441123 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
BRPF3-203ENST00000441123 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
BRPF3-203ENST00000441123 MAGEA1P43355 309 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 SMTNP53814 917 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 ETF1P62495 437 aaKnown RBP14.35□□□□□ -0.11
BRPF3-203ENST00000441123 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 CARD10Q9BWT7 1032 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 RNF26Q9BY78 433 aaPredicted RBP14.35□□□□□ -0.11
BRPF3-203ENST00000441123 DNM3Q9UQ16 869 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 TNKSO95271 1327 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 RPAP1Q9BWH6 1393 aaPredicted RBP14.35□□□□□ -0.11
BRPF3-203ENST00000441123 SCG2P13521 617 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 MTMR3Q13615 1198 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 TRIM58Q8NG06 486 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 SAMD15Q9P1V8 674 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 UTP11Q9Y3A2 253 aaKnown RBP14.35□□□□□ -0.11
BRPF3-203ENST00000441123 ATP8B1O43520 1251 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 FLOT1O75955 427 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 PPP1R7Q15435 360 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 TTC31Q49AM3 519 aaPredicted RBP14.35□□□□□ -0.11
BRPF3-203ENST00000441123 GSDMAQ96QA5 445 aa14.35□□□□□ -0.11
BRPF3-203ENST00000441123 SELENOSQ9BQE4 189 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms