RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 GDF15Q99988 308 aa13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 COL25A1Q9BXS0 654 aaPredicted RBP13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 PNMA3Q9UL41 463 aa13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
GTF3C5-206ENST00000439697 VCANP13611 3396 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 USP17L10C9JJH3 530 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 TNPO2O14787 897 aaKnown RBP13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 PRKAB2O43741 272 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 MBD4O95243 580 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 HDAC1Q13547 482 aaPredicted RBP13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 FAM110CQ1W6H9 321 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 ZSCAN25Q6NSZ9 544 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 KBTBD3Q8NAB2 608 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 SMCR8Q8TEV9 937 aaPredicted RBP13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 C12orf42Q96LP6 360 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 PUS7LQ9H0K6 701 aaKnown RBP13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 ASCC2Q9H1I8 757 aaPredicted RBP13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 MYH7P12883 1935 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
GTF3C5-206ENST00000439697 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 GUCY1A2P33402 732 aa13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 GCLCP48506 637 aaPredicted RBP13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 CERKLQ49MI3 558 aaPredicted RBP13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 OTUD7AQ8TE49 926 aaPredicted RBP13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 GPATCH3Q96I76 525 aa13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 MTMR10Q9NXD2 777 aa13.83□□□□□ -0.2
GTF3C5-206ENST00000439697 CYP2D6P10635 497 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 MAGEA10P43363 369 aaPredicted RBP13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 AAMPQ13685 434 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 NECAB2Q7Z6G3 386 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 PXYLP1Q8TE99 480 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 MORF4L1Q9UBU8 362 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 STXBP5LQ9Y2K9 1186 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 MGAMO43451 1857 aa13.82□□□□□ -0.2
GTF3C5-206ENST00000439697 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 BMP8BP34820 402 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 TRIM32Q13049 653 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 OSBP2Q969R2 916 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 STRBPQ96SI9 672 aaKnown RBP13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 SWAP70Q9UH65 585 aa13.81□□□□□ -0.2
GTF3C5-206ENST00000439697 GLRX3O76003 335 aaKnown RBP13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 IRF5Q13568 498 aa13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 SLC44A5Q8NCS7 719 aa13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 APPBP2Q92624 585 aa13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 SPTBN5Q9NRC6 3674 aaKnown RBP13.8□□□□□ -0.2
GTF3C5-206ENST00000439697 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 USP17L21D6R901 530 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 ERC2O15083 957 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 RNF113AO15541 343 aaKnown RBP13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 MX1P20591 662 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 HERVK_113P62684 666 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 SEPT2Q15019 361 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 LRIT3Q3SXY7 679 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 GPR153Q6NV75 609 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 GIMAP6Q6P9H5 292 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 CTR9Q6PD62 1173 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 SIAH1Q8IUQ4 282 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 TDHQ8IZJ6 230 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 DYNLL2Q96FJ2 89 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 TXNRD2Q9NNW7 524 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 CABP5Q9NP86 173 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 SLC4A4Q9Y6R1 1079 aa13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
GTF3C5-206ENST00000439697 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 GSG1L2A8MUP6 293 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 VCAM1P19320 739 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 USP14P54578 494 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 IRX3P78415 501 aaPredicted RBP13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 TMEM179Q6ZVK1 233 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 COA7Q96BR5 231 aa13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 UBE2OQ9C0C9 1292 aaKnown RBP13.78□□□□□ -0.2
GTF3C5-206ENST00000439697 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms