RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 IGKV6D-41A0A0C4DH26 115 aa21.81■■□□□ 1.08
RFTN1-202ENST00000431547 C19orf81C9J6K1 198 aa21.81■■□□□ 1.08
RFTN1-202ENST00000431547 USP17L10C9JJH3 530 aa21.81■■□□□ 1.08
RFTN1-202ENST00000431547 EPB41L2O43491 1005 aaKnown RBP21.81■■□□□ 1.08
RFTN1-202ENST00000431547 RANBP6O60518 1105 aaKnown RBP21.81■■□□□ 1.08
RFTN1-202ENST00000431547 SH3D19Q5HYK7 790 aa21.81■■□□□ 1.08
RFTN1-202ENST00000431547 FASTKD5Q7L8L6 764 aaKnown RBP21.81■■□□□ 1.08
RFTN1-202ENST00000431547 PLIN4Q96Q06 1357 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 TSPY2A6NKD2 308 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 ICA1Q05084 483 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 MOGSQ13724 837 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 RRP12Q5JTH9 1297 aaKnown RBP21.8■■□□□ 1.08
RFTN1-202ENST00000431547 ACER1Q8TDN7 264 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 ESR2Q92731 530 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 PTPN18Q99952 460 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 KIAA1683Q9H0B3 1180 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 CNNM2Q9H8M5 875 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 NEDD4P46934 1319 aa21.8■■□□□ 1.08
RFTN1-202ENST00000431547 SLC27A2O14975 620 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 MTMR2Q13614 643 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 CREB3L3Q68CJ9 461 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 OTUD7BQ6GQQ9 843 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 IFNL1Q8IU54 200 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 KRT23Q9C075 422 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 ARHGEF10LQ9HCE6 1279 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 WBP1LQ9NX94 342 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 MTMR4Q9NYA4 1195 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 NYAP2Q9P242 653 aa21.79■■□□□ 1.08
RFTN1-202ENST00000431547 A0A1W2PRG0 241 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 IGF2BP3O00425 579 aaKnown RBP eCLIP21.78■■□□□ 1.08
RFTN1-202ENST00000431547 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
RFTN1-202ENST00000431547 EEF2P13639 858 aaKnown RBP21.78■■□□□ 1.08
RFTN1-202ENST00000431547 USP14P54578 494 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 HMGCS2P54868 508 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 PPP4R3BQ5MIZ7 849 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 RNF20Q5VTR2 975 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 CLEC10AQ8IUN9 316 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 PROCA1Q8NCQ7 364 aaPredicted RBP21.78■■□□□ 1.08
RFTN1-202ENST00000431547 CEP95Q96GE4 821 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 SH2D4AQ9H788 454 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 TCP11L1Q9NUJ3 509 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 TMX2Q9Y320 296 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 TAF6LQ9Y6J9 622 aa21.78■■□□□ 1.08
RFTN1-202ENST00000431547 E7EWF7 191 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 ALDH1A1P00352 501 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 TRDNQ13061 729 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 GPAT2Q6NUI2 795 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 USP17L2Q6R6M4 530 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 ANKRD23Q86SG2 305 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 FEZ1Q99689 392 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 ZCCHC17Q9NP64 241 aaKnown RBP21.77■■□□□ 1.08
RFTN1-202ENST00000431547 IL17RBQ9NRM6 502 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 TMOD4Q9NZQ9 345 aa21.77■■□□□ 1.08
RFTN1-202ENST00000431547 B4E1Z4 1266 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 BTBD19C9JJ37 291 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 KDM4AO75164 1064 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 TTLL1O95922 423 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 NOVP48745 357 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 GADL1Q6ZQY3 521 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 FAM43AQ8N2R8 423 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 MKL1Q969V6 931 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 C12orf42Q96LP6 360 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 BEGAINQ9BUH8 593 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 EMILIN3Q9NT22 766 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 RNF186Q9NXI6 227 aa21.76■■□□□ 1.07
RFTN1-202ENST00000431547 ATP2B2Q01814 1243 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 TSGA10IPQ3SY00 556 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 STOX1Q6ZVD7 989 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 KCNB2Q92953 911 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 ZSWIM5Q9P217 1185 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 CLIP2Q9UDT6 1046 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 SYNPO2Q9UMS6 1093 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 AGTPBP1Q9UPW5 1226 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 SLC45A1Q9Y2W3 748 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 ATAD5Q96QE3 1844 aa21.75■■□□□ 1.07
RFTN1-202ENST00000431547 PHIPQ8WWQ0 1821 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 CA12O43570 354 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 HSPA4P34932 840 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 DGKZQ13574 1117 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 NCOA7Q8NI08 942 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 TTC14Q96N46 770 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 SAGE1Q9NXZ1 904 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 CEP350Q5VT06 3117 aa21.74■■□□□ 1.07
RFTN1-202ENST00000431547 PDHXO00330 501 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 NMT2O60551 498 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 ZKSCAN1P17029 563 aaPredicted RBP21.73■■□□□ 1.07
RFTN1-202ENST00000431547 ZYXQ15942 572 aaKnown RBP21.73■■□□□ 1.07
RFTN1-202ENST00000431547 CCDC178Q5BJE1 867 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 RALYLQ86SE5 291 aaKnown RBP21.73■■□□□ 1.07
RFTN1-202ENST00000431547 IQCA1Q86XH1 822 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 CFHR5Q9BXR6 569 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 VCPKMTQ9H867 229 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 LAMA4Q16363 1823 aa21.73■■□□□ 1.07
RFTN1-202ENST00000431547 TRPA1O75762 1119 aa21.72■■□□□ 1.07
RFTN1-202ENST00000431547 HOXA7P31268 230 aaPredicted RBP21.72■■□□□ 1.07
RFTN1-202ENST00000431547 PABPC4Q13310 644 aaKnown RBP eCLIP21.72■■□□□ 1.07
RFTN1-202ENST00000431547 C8orf34Q49A92 452 aa21.72■■□□□ 1.07
RFTN1-202ENST00000431547 TREML2Q5T2D2 321 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms