RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
FIRRE-201ENST00000427391 AFMP43652 599 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 IQCA1Q86XH1 822 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
FIRRE-201ENST00000427391 DHX58Q96C10 678 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 MED15Q96RN5 788 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 BRIP1Q9BX63 1249 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
FIRRE-201ENST00000427391 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 NEMFO60524 1076 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 COBLO75128 1261 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 TPM4P67936 248 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 NCBP1Q09161 790 aaKnown RBP13.32□□□□□ -0.28
FIRRE-201ENST00000427391 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 NARFQ9UHQ1 456 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 A0A1B0GUL6 1792 aa13.32□□□□□ -0.28
FIRRE-201ENST00000427391 GSDMDP57764 484 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 NPY5RQ15761 445 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
FIRRE-201ENST00000427391 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
FIRRE-201ENST00000427391 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
FIRRE-201ENST00000427391 TM4SF1P30408 202 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 NFIXQ14938 502 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
FIRRE-201ENST00000427391 SMYD4Q8IYR2 804 aaPredicted RBP13.31□□□□□ -0.28
FIRRE-201ENST00000427391 CCNL1Q9UK58 526 aaPredicted RBP13.31□□□□□ -0.28
FIRRE-201ENST00000427391 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
FIRRE-201ENST00000427391 TRIM75PA6NK02 468 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 KRT2P35908 639 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 RGS22Q8NE09 1264 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
FIRRE-201ENST00000427391 SCN7AQ01118 1682 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 RASGRP2Q7LDG7 609 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 MAP7D2Q96T17 732 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 SAMSN1Q9NSI8 373 aaKnown RBP13.3□□□□□ -0.28
FIRRE-201ENST00000427391 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 CNTNAP4Q9C0A0 1308 aa13.3□□□□□ -0.28
FIRRE-201ENST00000427391 STX17P56962 302 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 KLHL10Q6JEL2 608 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 SLC44A5Q8NCS7 719 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
FIRRE-201ENST00000427391 SMARCE1Q969G3 411 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 PPP1R13BQ96KQ4 1090 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
FIRRE-201ENST00000427391 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 NFE2L3Q9Y4A8 694 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
FIRRE-201ENST00000427391 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
FIRRE-201ENST00000427391 VWA3AA6NCI4 1184 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 KCNA4P22459 653 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 CDC25AP30304 524 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 PIK3AP1Q6ZUJ8 805 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
FIRRE-201ENST00000427391 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 RASGRP4Q8TDF6 673 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
FIRRE-201ENST00000427391 MTA3Q9BTC8 594 aa13.29□□□□□ -0.28
FIRRE-201ENST00000427391 STAG2Q8N3U4 1231 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 CCDC150Q8NCX0 1101 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 LRRN4CLQ8ND94 238 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 ANKRD7Q92527 254 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 QTRT2Q9H974 415 aaKnown RBP13.28□□□□□ -0.28
FIRRE-201ENST00000427391 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
FIRRE-201ENST00000427391 USP17L3A6NCW0 530 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 USP17L4A6NCW7 530 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 FGRP09769 529 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 RCAN1P53805 252 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 SYT10Q6XYQ8 523 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 USP17L1Q7RTZ2 530 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 SH3RF3Q8TEJ3 882 aaPredicted RBP13.28□□□□□ -0.28
FIRRE-201ENST00000427391 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
FIRRE-201ENST00000427391 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.28
FIRRE-201ENST00000427391 XBP1P17861 261 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.28
FIRRE-201ENST00000427391 MCM7P33993 719 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 SARSP49591 514 aaKnown RBP13.27□□□□□ -0.28
FIRRE-201ENST00000427391 CBX1P83916 185 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 PTGDRQ13258 359 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 MORC3Q14149 939 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 VSTM4Q8IW00 320 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 CTCFLQ8NI51 663 aaPredicted RBP13.27□□□□□ -0.28
FIRRE-201ENST00000427391 TNFRSF25Q93038 417 aa13.27□□□□□ -0.28
FIRRE-201ENST00000427391 CPVLQ9H3G5 476 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms