RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 MTMR2Q13614 643 aa30.09■■■□□ 2.41
TSPAN3-203ENST00000424443 STAG1Q8WVM7 1258 aa30.09■■■□□ 2.41
TSPAN3-203ENST00000424443 KANSL2Q9H9L4 492 aa30.09■■■□□ 2.41
TSPAN3-203ENST00000424443 ARHGEF10LQ9HCE6 1279 aa30.09■■■□□ 2.41
TSPAN3-203ENST00000424443 INCENPQ9NQS7 918 aa30.09■■■□□ 2.41
TSPAN3-203ENST00000424443 TMOD4Q9NZQ9 345 aa30.09■■■□□ 2.41
TSPAN3-203ENST00000424443 C19orf81C9J6K1 198 aa30.08■■■□□ 2.41
TSPAN3-203ENST00000424443 ORC4O43929 436 aa30.08■■■□□ 2.41
TSPAN3-203ENST00000424443 HSPA1AP0DMV8 641 aaKnown RBP30.08■■■□□ 2.41
TSPAN3-203ENST00000424443 HSPA1BP0DMV9 641 aaKnown RBP30.08■■■□□ 2.41
TSPAN3-203ENST00000424443 HMGCS2P54868 508 aa30.08■■■□□ 2.41
TSPAN3-203ENST00000424443 TFAP4Q01664 338 aa30.08■■■□□ 2.41
TSPAN3-203ENST00000424443 IGF2BP3O00425 579 aaKnown RBP eCLIP30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 TRPA1O75762 1119 aa30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 ATP2B2Q01814 1243 aa30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 FAM47AQ5JRC9 791 aa30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 PTPN18Q99952 460 aa30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 LSG1Q9H089 658 aaKnown RBP30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 RNF186Q9NXI6 227 aa30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 RBM8AQ9Y5S9 174 aaKnown RBP30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 LAMA4Q16363 1823 aa30.07■■■□□ 2.4
TSPAN3-203ENST00000424443 TBC1D10CQ8IV04 446 aa30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 SH2D4AQ9H788 454 aa30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 BTBD19C9JJ37 291 aa30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 FGRP09769 529 aa30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 USP14P54578 494 aa30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 ZYXQ15942 572 aaKnown RBP30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 PROCA1Q8NCQ7 364 aaPredicted RBP30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 SAGE1Q9NXZ1 904 aa30.06■■■□□ 2.4
TSPAN3-203ENST00000424443 SH3D19Q5HYK7 790 aa30.05■■■□□ 2.4
TSPAN3-203ENST00000424443 USP17L2Q6R6M4 530 aa30.05■■■□□ 2.4
TSPAN3-203ENST00000424443 ANKRD23Q86SG2 305 aa30.05■■■□□ 2.4
TSPAN3-203ENST00000424443 NEDD1Q8NHV4 660 aa30.05■■■□□ 2.4
TSPAN3-203ENST00000424443 ACER1Q8TDN7 264 aa30.05■■■□□ 2.4
TSPAN3-203ENST00000424443 NBPF3Q9H094 633 aa30.05■■■□□ 2.4
TSPAN3-203ENST00000424443 PTPRFP10586 1907 aa30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 CLEC10AQ8IUN9 316 aa30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 FAM43AQ8N2R8 423 aa30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 ESR2Q92731 530 aa30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 KIAA1683Q9H0B3 1180 aa30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 ZCCHC17Q9NP64 241 aaKnown RBP30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 TACC3Q9Y6A5 838 aa30.04■■■□□ 2.4
TSPAN3-203ENST00000424443 EEF2P13639 858 aaKnown RBP30.03■■■□□ 2.4
TSPAN3-203ENST00000424443 PPP4R3BQ5MIZ7 849 aa30.03■■■□□ 2.4
TSPAN3-203ENST00000424443 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.03■■■□□ 2.4
TSPAN3-203ENST00000424443 CNNM2Q9H8M5 875 aa30.03■■■□□ 2.4
TSPAN3-203ENST00000424443 PDHXO00330 501 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 CYP21A2P08686 494 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 NT5C2P49902 561 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 TRDNQ13061 729 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 MOGSQ13724 837 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 TAF1CQ15572 869 aaPredicted RBP30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 AGTPBP1Q9UPW5 1226 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 PLIN4Q96Q06 1357 aa30.02■■■□□ 2.4
TSPAN3-203ENST00000424443 REC8O95072 547 aa30.01■■■□□ 2.4
TSPAN3-203ENST00000424443 PABPC4Q13310 644 aaKnown RBP eCLIP30.01■■■□□ 2.44e-7■■■■□ 24.1
TSPAN3-203ENST00000424443 CEP95Q96GE4 821 aa30.01■■■□□ 2.4
TSPAN3-203ENST00000424443 KRT23Q9C075 422 aa30.01■■■□□ 2.4
TSPAN3-203ENST00000424443 NEDD4P46934 1319 aa30.01■■■□□ 2.39
TSPAN3-203ENST00000424443 MTMR4Q9NYA4 1195 aa30.01■■■□□ 2.39
TSPAN3-203ENST00000424443 NYAP2Q9P242 653 aa30.01■■■□□ 2.39
TSPAN3-203ENST00000424443 TMX2Q9Y320 296 aa30.01■■■□□ 2.39
TSPAN3-203ENST00000424443 A0A1W2PRG0 241 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 DGKZQ13574 1117 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 RNF20Q5VTR2 975 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 GPAT2Q6NUI2 795 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 ZFYVE28Q9HCC9 887 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 CLIP2Q9UDT6 1046 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 TSKSQ9UJT2 592 aa30■■■□□ 2.39
TSPAN3-203ENST00000424443 GREB1LQ9C091 1923 aaPredicted RBP30■■■□□ 2.39
TSPAN3-203ENST00000424443 IGKV6D-41A0A0C4DH26 115 aa29.99■■■□□ 2.39
TSPAN3-203ENST00000424443 FOXN1O15353 648 aa29.99■■■□□ 2.39
TSPAN3-203ENST00000424443 TBC1D8O95759 1140 aa29.99■■■□□ 2.39
TSPAN3-203ENST00000424443 TTLL1O95922 423 aa29.99■■■□□ 2.39
TSPAN3-203ENST00000424443 CTCFP49711 727 aaPredicted RBP29.99■■■□□ 2.39
TSPAN3-203ENST00000424443 EMILIN3Q9NT22 766 aa29.99■■■□□ 2.39
TSPAN3-203ENST00000424443 RAD21O60216 631 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 TREML2Q5T2D2 321 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 SIAH1Q8IUQ4 282 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 GOPCQ9HD26 462 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 PNMA3Q9UL41 463 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 STX8Q9UNK0 236 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 SLC45A1Q9Y2W3 748 aa29.98■■■□□ 2.39
TSPAN3-203ENST00000424443 LOC285556D6RIA3 1793 aa29.97■■■□□ 2.39
TSPAN3-203ENST00000424443 B4E1Z4 1266 aa29.97■■■□□ 2.39
TSPAN3-203ENST00000424443 KDM4AO75164 1064 aa29.97■■■□□ 2.39
TSPAN3-203ENST00000424443 RALYLQ86SE5 291 aaKnown RBP29.97■■■□□ 2.39
TSPAN3-203ENST00000424443 C12orf42Q96LP6 360 aa29.97■■■□□ 2.39
TSPAN3-203ENST00000424443 PARK7Q99497 189 aaKnown RBP29.97■■■□□ 2.39
TSPAN3-203ENST00000424443 OSBPP22059 807 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 CRHR2Q13324 411 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 NECTIN1Q15223 517 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 CREB3L3Q68CJ9 461 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 IQCA1Q86XH1 822 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 VCPKMTQ9H867 229 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 E7EWF7 191 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 SLC27A2O14975 620 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 LPAR1Q92633 364 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 CFHR5Q9BXR6 569 aa29.96■■■□□ 2.39
TSPAN3-203ENST00000424443 IRX3P78415 501 aaPredicted RBP29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms