RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 SWAP70Q9UH65 585 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 PHF20L1A8MW92 1017 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 UBE2Q2LH0YL09 131 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 PKP1Q13835 747 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 WTAPQ15007 396 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 MICU3Q86XE3 530 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
HPS4-204ENST00000422379 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 ADD1P35611 737 aaKnown RBP10.5□□□□□ -0.73
HPS4-204ENST00000422379 TROAPQ12815 778 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
HPS4-204ENST00000422379 CCDC84Q86UT8 332 aaPredicted RBP10.5□□□□□ -0.73
HPS4-204ENST00000422379 ZNF654Q8IZM8 581 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 ANKS1AQ92625 1134 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 GBP4Q96PP9 640 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.735e-8■■■■■ 32.9
HPS4-204ENST00000422379 MTMR4Q9NYA4 1195 aa10.5□□□□□ -0.73
HPS4-204ENST00000422379 NAP1L2Q9ULW6 460 aaPredicted RBP10.5□□□□□ -0.73
HPS4-204ENST00000422379 POLR2AP24928 1970 aaKnown RBP10.5□□□□□ -0.73
HPS4-204ENST00000422379 TBC1D12O60347 775 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 GH2P01242 217 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 NUCB2P80303 420 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 FMR1Q06787 632 aaKnown RBP eCLIP10.49□□□□□ -0.73
HPS4-204ENST00000422379 SEPT2Q15019 361 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 SLC35G1Q2M3R5 365 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 IFIT1BQ5T764 474 aaKnown RBP10.49□□□□□ -0.73
HPS4-204ENST00000422379 IQCA1Q86XH1 822 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 APOBEC3FQ8IUX4 373 aaKnown RBP10.49□□□□□ -0.73
HPS4-204ENST00000422379 CMTR1Q8N1G2 835 aaKnown RBP10.49□□□□□ -0.73
HPS4-204ENST00000422379 ZSCAN31Q96LW9 406 aaPredicted RBP10.49□□□□□ -0.73
HPS4-204ENST00000422379 MTA3Q9BTC8 594 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 SH2B1Q9NRF2 756 aaPredicted RBP10.49□□□□□ -0.73
HPS4-204ENST00000422379 HERC5Q9UII4 1024 aaKnown RBP10.49□□□□□ -0.73
HPS4-204ENST00000422379 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
HPS4-204ENST00000422379 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 PRKCSHP14314 528 aaPredicted RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 TNNI2P48788 182 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 TNFAIP1Q13829 316 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 NTRK3Q16288 839 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 USP50Q70EL3 339 aaPredicted RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 LRRC47Q8N1G4 583 aaKnown RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 NSUN7Q8NE18 718 aaKnown RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 INTS4Q96HW7 963 aaKnown RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 RRAGCQ9HB90 399 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 STX8Q9UNK0 236 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 SLC12A7Q9Y666 1083 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 NID2Q14112 1375 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 SCN4AP35499 1836 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 MYH8P13535 1937 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 A0A1W2PRG0 241 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 ZBTB43O43298 467 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 FDPSP14324 419 aaKnown RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 INPP5BP32019 993 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 SART3Q15020 963 aaKnown RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 CLEC17AQ6ZS10 378 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 ZNF526Q8TF50 670 aaPredicted RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 GLIS2Q9BZE0 524 aaPredicted RBP10.48□□□□□ -0.73
HPS4-204ENST00000422379 ZNF287Q9HBT7 754 aa10.48□□□□□ -0.73
HPS4-204ENST00000422379 CCDC69A6NI79 296 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 PLEKHA8P1O95397 391 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 PCNTO95613 3336 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 METAP2P50579 478 aaKnown RBP eCLIP10.47□□□□□ -0.73
HPS4-204ENST00000422379 FUT2Q10981 343 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 ABCB5Q2M3G0 1257 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 KRT26Q7Z3Y9 468 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 NBPF11Q86T75 865 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 STAG2Q8N3U4 1231 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 PNMA1Q8ND90 353 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 SMARCC2Q8TAQ2 1214 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 ACER1Q8TDN7 264 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 NUP133Q8WUM0 1156 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 ZBTB21Q9ULJ3 1066 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 ZDHHC9Q9Y397 364 aa10.47□□□□□ -0.73
HPS4-204ENST00000422379 ERICH2A1L162 156 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 GOLGA8AA7E2F4 631 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 TRAF5O00463 557 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 TRAK2O60296 914 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
HPS4-204ENST00000422379 CAP2P40123 477 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 ECE1P42892 770 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 MAP1SQ66K74 1059 aaPredicted RBP10.46□□□□□ -0.73
HPS4-204ENST00000422379 MOB2Q70IA6 237 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 FANCBQ8NB91 859 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 DDX11Q96FC9 970 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 CCDC17Q96LX7 622 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 CLIP2Q9UDT6 1046 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
HPS4-204ENST00000422379 PAPPA2Q9BXP8 1791 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms