RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 GNG11P61952 73 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 CCDC94Q9BW85 323 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-213ENST00000421756 UBA5Q9GZZ9 404 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 BRMS1Q9HCU9 246 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 BSDC1Q9NW68 430 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-213ENST00000421756 CTNND2Q9UQB3 1225 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 ZNF804BA4D1E1 1349 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 GSDMDP57764 484 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 PKN1Q16512 942 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 TTC38Q5R3I4 469 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 RRAGBQ5VZM2 374 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-213ENST00000421756 HOOK1Q9UJC3 728 aaKnown RBP15.21■□□□□ 0.03
MCF2L-213ENST00000421756 TSPY3P0CV98 308 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 TSPY8P0CW00 308 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 PTPREP23469 700 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.03
MCF2L-213ENST00000421756 ST7Q9NRC1 585 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 HPSEQ9Y251 543 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 NWD2Q9ULI1 1742 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 SLIT2O94813 1529 aa15.21■□□□□ 0.03
MCF2L-213ENST00000421756 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.02
MCF2L-213ENST00000421756 ALX1Q15699 326 aa15.21■□□□□ 0.02
MCF2L-213ENST00000421756 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.02
MCF2L-213ENST00000421756 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 INF2Q27J81 1249 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 TMTC2Q8N394 836 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 MAP7D2Q96T17 732 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
MCF2L-213ENST00000421756 PLCD1P51178 756 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 UBE4AQ14139 1066 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 SEC23AQ15436 765 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 TOGARAM2Q6ZUX3 1019 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 ZNF444Q8N0Y2 327 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-213ENST00000421756 LDHBP07195 334 aaKnown RBP15.2■□□□□ 0.02
MCF2L-213ENST00000421756 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 MXD3Q9BW11 206 aa15.2■□□□□ 0.02
MCF2L-213ENST00000421756 TOGARAM1Q9Y4F4 1720 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 TROAPQ12815 778 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 INTS13Q9NVM9 706 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 SOWAHDA6NJG2 315 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 FBXL16Q8N461 479 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 CARD6Q9BX69 1037 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 TAB2Q9NYJ8 693 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 GDAQ9Y2T3 454 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 CDC25BP30305 580 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 USP17L2Q6R6M4 530 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 PNMA1Q8ND90 353 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-213ENST00000421756 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
MCF2L-213ENST00000421756 UFL1O94874 794 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 CUL4BQ13620 913 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 TEX35Q5T0J7 233 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 AK7Q96M32 723 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 FOXP1Q9H334 677 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-213ENST00000421756 COL4A1P02462 1669 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 AKAP11Q9UKA4 1901 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 FRMPD2Q68DX3 1309 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-213ENST00000421756 LETM2Q2VYF4 491 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 CCDC150Q8NCX0 1101 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 MED15Q96RN5 788 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 BAG1Q99933 345 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-213ENST00000421756 TUBE1Q9UJT0 475 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 TRIM49BA6NDI0 452 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 GJA10Q969M2 543 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 NOL10Q9BSC4 688 aaKnown RBP15.18■□□□□ 0.02
MCF2L-213ENST00000421756 CEP131Q9UPN4 1083 aa15.18■□□□□ 0.02
MCF2L-213ENST00000421756 PNPLA7Q6ZV29 1317 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 ARHGAP29Q52LW3 1261 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 JAKMIP3Q5VZ66 844 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 PCMTD1Q96MG8 357 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-213ENST00000421756 TFR2Q9UP52 801 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 COL1A1P02452 1464 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-213ENST00000421756 PARP4Q9UKK3 1724 aaKnown RBP15.17■□□□□ 0.02
MCF2L-213ENST00000421756 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 CBFA2T2O43439 604 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 NEMFO60524 1076 aa15.17■□□□□ 0.02
MCF2L-213ENST00000421756 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
MCF2L-213ENST00000421756 SRPRBQ9Y5M8 271 aaKnown RBP15.17■□□□□ 0.02
MCF2L-213ENST00000421756 N4BP3O15049 544 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 TYW1BQ6NUM6 668 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 FBXO38Q6PIJ6 1188 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
MCF2L-213ENST00000421756 MYH2Q9UKX2 1941 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 SCG2P13521 617 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 SCNN1DP51172 638 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 PPFIBP1Q86W92 1011 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 RNF26Q9BY78 433 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-213ENST00000421756 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.16■□□□□ 0.02
MCF2L-213ENST00000421756 USP21Q9UK80 565 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 FAM205AQ6ZU69 1335 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 BAZ2AQ9UIF9 1905 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms