RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ZNF622Q969S3 477 aaKnown RBP eCLIP10.13□□□□□ -0.79
SNCA-206ENST00000420646 ARPP21Q9UBL0 812 aaPredicted RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 STK36Q9NRP7 1315 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 CASP1P29466 404 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 EIF6P56537 245 aaKnown RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 ZNF174Q15697 407 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 SLC35G1Q2M3R5 365 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 CCDC144BQ3MJ40 725 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 TEX11Q8IYF3 940 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 BRWD3Q6RI45 1802 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 GOLGA6L19H0YKK7 550 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 ORC4O43929 436 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 BBOX1O75936 387 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 TSPY3P0CV98 308 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 TSPY8P0CW00 308 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 UBR3Q6ZT12 1888 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 TMTC3Q6ZXV5 915 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 CERS5Q8N5B7 392 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 CTCFLQ8NI51 663 aaPredicted RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 WASF1Q92558 559 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 RNF26Q9BY78 433 aaPredicted RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 PDGFDQ9GZP0 370 aaPredicted RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 KCNH3Q9ULD8 1083 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 R3HCC1Q9Y3T6 440 aaKnown RBP10.13□□□□□ -0.79
SNCA-206ENST00000420646 PCNTO95613 3336 aa10.13□□□□□ -0.79
SNCA-206ENST00000420646 POLR2DO15514 142 aaKnown RBP10.12□□□□□ -0.79
SNCA-206ENST00000420646 BAG3O95817 575 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 SRGNP10124 158 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 ZNF75DP51815 510 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 NPY5RQ15761 445 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 PNMA1Q8ND90 353 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 KAT14Q9H8E8 782 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 DBNDD1Q9H9R9 158 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 CTAGE5O15320 804 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 IL1R1P14778 569 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 CACNB3P54284 484 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 SBK1Q52WX2 424 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
SNCA-206ENST00000420646 STAMQ92783 540 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 PDS5AQ29RF7 1337 aaKnown RBP10.12□□□□□ -0.79
SNCA-206ENST00000420646 CNTNAP5Q8WYK1 1306 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 ECM29Q5VYK3 1845 aa10.12□□□□□ -0.79
SNCA-206ENST00000420646 CDC25AP30304 524 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 HOXA10P31260 410 aaPredicted RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 RHBDL3P58872 404 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 RESP18Q5W5W9 173 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 PIK3AP1Q6ZUJ8 805 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 ZNF444Q8N0Y2 327 aaPredicted RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 KRI1Q8N9T8 703 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 NOL10Q9BSC4 688 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 PHF20Q9BVI0 1012 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 CSRNP2Q9H175 543 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 FOXP1Q9H334 677 aaPredicted RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 VAT1LQ9HCJ6 419 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 ANO10Q9NW15 660 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 FBXO2Q9UK22 296 aaPredicted RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 HPSEQ9Y251 543 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 PRPF3O43395 683 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 CYTH3O43739 400 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 ZNF500O60304 480 aaPredicted RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 PPP6R2O75170 966 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 RASA1P20936 1047 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 CHRNA5P30532 468 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 ZRSR1Q15695 479 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 FILIP1Q7Z7B0 1213 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 CNNM3Q8NE01 707 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 ZC3H12CQ9C0D7 883 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 FLT1P17948 1338 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 A0A087X0B3 334 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 PRR29P0C7W0 189 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 CDK8P49336 464 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 USP17L2Q6R6M4 530 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 PLA2G4DQ86XP0 818 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 DDX4Q9NQI0 724 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
SNCA-206ENST00000420646 CLIP2Q9UDT6 1046 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 DAGLAQ9Y4D2 1042 aa10.11□□□□□ -0.79
SNCA-206ENST00000420646 ATP1A3P13637 1013 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 BMP6P22004 513 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 KRT2P35908 639 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 NLRP5P59047 1200 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 SHROOM1Q2M3G4 852 aaPredicted RBP10.1□□□□□ -0.79
SNCA-206ENST00000420646 RILPL1Q5EBL4 403 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 TMEM47Q9BQJ4 181 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 SERTAD1Q9UHV2 236 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 TTF2Q9UNY4 1162 aaKnown RBP10.1□□□□□ -0.79
SNCA-206ENST00000420646 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 PCDHA5Q9Y5H7 936 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 NID2Q14112 1375 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms