RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 NEDD4P46934 1319 aa16.96■□□□□ 0.3
SAPCD1-208ENST00000415669 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 HMGCS2P54868 508 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 DGKZQ13574 1117 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 ZYXQ15942 572 aaKnown RBP16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 FAM47AQ5JRC9 791 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 AKNAD1Q5T1N1 836 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 OTUD7BQ6GQQ9 843 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 STAG1Q8WVM7 1258 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 PTPN18Q99952 460 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 RNF41Q9H4P4 317 aaPredicted RBP16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 TACC3Q9Y6A5 838 aa16.95■□□□□ 0.3
SAPCD1-208ENST00000415669 PARP14Q460N5 1801 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 BTBD19C9JJ37 291 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 ORC4O43929 436 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 BACE1P56817 501 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 TFAP4Q01664 338 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 FASTKD5Q7L8L6 764 aaKnown RBP16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 MAP4K1Q92918 833 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 ARHGEF10LQ9HCE6 1279 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 TMOD4Q9NZQ9 345 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 TSKSQ9UJT2 592 aa16.94■□□□□ 0.3
SAPCD1-208ENST00000415669 CA12O43570 354 aa16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 TRPA1O75762 1119 aa16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 ALDH1A1P00352 501 aa16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 MOGSQ13724 837 aa16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
SAPCD1-208ENST00000415669 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 CYP21A2P08686 494 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 FGRP09769 529 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 EEF2P13639 858 aaKnown RBP16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 SH3D19Q5HYK7 790 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 USP17L2Q6R6M4 530 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 ANKRD23Q86SG2 305 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 PROCA1Q8NCQ7 364 aaPredicted RBP16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 CEP95Q96GE4 821 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 KIAA1683Q9H0B3 1180 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
SAPCD1-208ENST00000415669 A0A1W2PRG0 241 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 PDHXO00330 501 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 FOXN1O15353 648 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 USP14P54578 494 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 TAF1CQ15572 869 aaPredicted RBP16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 TREML2Q5T2D2 321 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 GPAT2Q6NUI2 795 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 ESR2Q92731 530 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 AGTPBP1Q9UPW5 1226 aa16.91■□□□□ 0.3
SAPCD1-208ENST00000415669 CASP8AP2Q9UKL3 1982 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 B4E1Z4 1266 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 RAD21O60216 631 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 REC8O95072 547 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 CRHR2Q13324 411 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 CNNM2Q9H8M5 875 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 EMILIN3Q9NT22 766 aa16.9■□□□□ 0.3
SAPCD1-208ENST00000415669 NMT2O60551 498 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 KDM4AO75164 1064 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 TTLL1O95922 423 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 TRDNQ13061 729 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 PARK7Q99497 189 aaKnown RBP16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 KRT23Q9C075 422 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 GOPCQ9HD26 462 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 MTMR4Q9NYA4 1195 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 STX8Q9UNK0 236 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 TMX2Q9Y320 296 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 COL11A1P12107 1806 aaPredicted RBP16.89■□□□□ 0.29
SAPCD1-208ENST00000415669 MGAMO43451 1857 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 E7EWF7 191 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 SLC27A2O14975 620 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 HSPA8P11142 646 aaKnown RBP16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 VCAM1P19320 739 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 CTCFP49711 727 aaPredicted RBP16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 NKX2-3Q8TAU0 364 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 VCPKMTQ9H867 229 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 ZFYVE28Q9HCC9 887 aa16.88■□□□□ 0.29
SAPCD1-208ENST00000415669 IL17RBQ9NRM6 502 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms