RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 ABCB5Q2M3G0 1257 aa29.64■■■□□ 2.34
AC005540.1-201ENST00000413911 PLEKHH3Q7Z736 793 aa29.64■■■□□ 2.34
AC005540.1-201ENST00000413911 TTC6Q86TZ1 520 aa29.64■■■□□ 2.34
AC005540.1-201ENST00000413911 C7orf61Q8IZ16 206 aa29.64■■■□□ 2.34
AC005540.1-201ENST00000413911 FEZ1Q99689 392 aa29.64■■■□□ 2.34
AC005540.1-201ENST00000413911 USP17L15C9J2P7 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L13C9JLJ4 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L11C9JVI0 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L18D6R9N7 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L22D6RA61 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L17D6RBQ6 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L19D6RCP7 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L20D6RJB6 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 USP17L24Q0WX57 530 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 PDE3AQ14432 1141 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 CATSPERGQ6ZRH7 1159 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 GTF3C2Q8WUA4 911 aaPredicted RBP29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 KIAA1683Q9H0B3 1180 aa29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 ZMYND8Q9ULU4 1186 aaPredicted RBP29.63■■■□□ 2.33
AC005540.1-201ENST00000413911 PDE6AP16499 860 aa29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 ZKSCAN1P17029 563 aaPredicted RBP29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 VCAM1P19320 739 aa29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 CCND3P30281 292 aaPredicted RBP29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 GABPAQ06546 454 aa29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 C11orf49Q9H6J7 331 aa29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 RABGAP1Q9Y3P9 1069 aa29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 PFASO15067 1338 aa29.62■■■□□ 2.33
AC005540.1-201ENST00000413911 MAGEB6P1A0A0J9YX57 407 aa29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 A0A1W2PPC1 479 aa29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 RGS2P41220 211 aa29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 LHX8Q68G74 356 aa29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 TMED8Q6PL24 325 aaPredicted RBP29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 SIRT2Q8IXJ6 389 aa29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 GDF15Q99988 308 aa29.61■■■□□ 2.33
AC005540.1-201ENST00000413911 SLC9C2Q5TAH2 1124 aa29.6■■■□□ 2.33
AC005540.1-201ENST00000413911 CCAR1Q8IX12 1150 aaKnown RBP29.6■■■□□ 2.33
AC005540.1-201ENST00000413911 LRCH3Q96II8 777 aa29.6■■■□□ 2.33
AC005540.1-201ENST00000413911 APBA2Q99767 749 aa29.6■■■□□ 2.33
AC005540.1-201ENST00000413911 BTBD7Q9P203 1132 aa29.6■■■□□ 2.33
AC005540.1-201ENST00000413911 TCRBV5S4A2TA0A5A2 114 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 APBB1O00213 710 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 USP14P54578 494 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 SEPT2Q15019 361 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 TRMT44Q8IYL2 757 aaKnown RBP29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 EDC3Q96F86 508 aaKnown RBP29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 FLRT1Q9NZU1 646 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 ZBED9Q6R2W3 1325 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 NAV1Q8NEY1 1877 aa29.59■■■□□ 2.33
AC005540.1-201ENST00000413911 POLR3DP05423 398 aaPredicted RBP29.58■■■□□ 2.33
AC005540.1-201ENST00000413911 SYN1P17600 705 aa29.58■■■□□ 2.33
AC005540.1-201ENST00000413911 MAP2K5Q13163 448 aa29.58■■■□□ 2.33
AC005540.1-201ENST00000413911 ZNF532Q9HCE3 1301 aa29.58■■■□□ 2.33
AC005540.1-201ENST00000413911 CABP5Q9NP86 173 aa29.58■■■□□ 2.33
AC005540.1-201ENST00000413911 A0A1W2PRG0 241 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 GOLIM4O00461 696 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 CYP2D6P10635 497 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 COL6A1P12109 1028 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 TTF1Q15361 905 aaPredicted RBP29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 SLFNL1Q499Z3 407 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 HSP90AB4PQ58FF6 505 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 LBX2Q6XYB7 198 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 LCORLQ8N3X6 602 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 SDR42E1Q8WUS8 393 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 RPAP3Q9H6T3 665 aaPredicted RBP29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 MCM9Q9NXL9 1143 aa29.57■■■□□ 2.32
AC005540.1-201ENST00000413911 SPDYE16A6NNV3 312 aaPredicted RBP29.56■■■□□ 2.32
AC005540.1-201ENST00000413911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.56■■■□□ 2.32
AC005540.1-201ENST00000413911 DNAJC2Q99543 621 aaKnown RBP29.56■■■□□ 2.32
AC005540.1-201ENST00000413911 CRNKL1Q9BZJ0 848 aaKnown RBP29.56■■■□□ 2.32
AC005540.1-201ENST00000413911 PTPREP23469 700 aa29.55■■■□□ 2.32
AC005540.1-201ENST00000413911 BMP8BP34820 402 aa29.55■■■□□ 2.32
AC005540.1-201ENST00000413911 CLASRPQ8N2M8 674 aaKnown RBP29.55■■■□□ 2.32
AC005540.1-201ENST00000413911 SLC44A5Q8NCS7 719 aa29.55■■■□□ 2.32
AC005540.1-201ENST00000413911 KIF1BPQ96EK5 621 aa29.55■■■□□ 2.32
AC005540.1-201ENST00000413911 DCP1AQ9NPI6 582 aaPredicted RBP29.55■■■□□ 2.32
AC005540.1-201ENST00000413911 CCNA1P78396 465 aa29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 KIAA1755Q5JYT7 1200 aa29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 WDR78Q5VTH9 848 aa29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 BCL11AQ9H165 835 aa29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 CWC22Q9HCG8 908 aaKnown RBP29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 ZBTB40Q9NUA8 1239 aa29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 COL6A3P12111 3177 aa29.54■■■□□ 2.32
AC005540.1-201ENST00000413911 DNAH12Q6ZR08 3092 aa29.53■■■□□ 2.32
AC005540.1-201ENST00000413911 SLC15A5A6NIM6 579 aa29.53■■■□□ 2.32
AC005540.1-201ENST00000413911 SMIM22K7EJ46 135 aa29.53■■■□□ 2.32
AC005540.1-201ENST00000413911 RPAP2Q8IXW5 612 aaPredicted RBP29.53■■■□□ 2.32
AC005540.1-201ENST00000413911 COG6Q9Y2V7 657 aa29.53■■■□□ 2.32
AC005540.1-201ENST00000413911 PRKAB2O43741 272 aa29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 CHGBP05060 677 aa29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 MAGEA10P43363 369 aaPredicted RBP29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 DIEXFQ68CQ4 756 aaKnown RBP29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 NPLOC4Q8TAT6 608 aa29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 DYNLL2Q96FJ2 89 aa29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 ARMT1Q9H993 441 aa29.52■■■□□ 2.32
AC005540.1-201ENST00000413911 MPHOSPH10O00566 681 aaKnown RBP29.51■■■□□ 2.31
AC005540.1-201ENST00000413911 IFIT2P09913 472 aaKnown RBP29.51■■■□□ 2.31
AC005540.1-201ENST00000413911 GRB14Q14449 540 aa29.51■■■□□ 2.31
AC005540.1-201ENST00000413911 LRRC26Q2I0M4 334 aa29.51■■■□□ 2.31
AC005540.1-201ENST00000413911 RLFQ13129 1914 aa29.5■■■□□ 2.31
AC005540.1-201ENST00000413911 GLRX3O76003 335 aaKnown RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms