RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SUGCTQ9HAC7 445 aa6.83□□□□□ -1.32
HMGB3P31-201ENST00000413333 hCG_2014768A0A024R1R8 64 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 DNAJC6O75061 913 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 CLEC3AO75596 197 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 UBOX5O94941 541 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 CCNFP41002 786 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 PMS1P54277 932 aaKnown RBP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 IGBP1P78318 339 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 IGF2-ASQ6U949 168 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 LINC00114Q6XXX2 140 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 PPFIBP1Q86W92 1011 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZNF669Q96BR6 464 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZNF512BQ96KM6 892 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 SPC25Q9HBM1 224 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 SUCOQ9UBS9 1254 aaKnown RBP6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 ACTL7BQ9Y614 415 aa6.82□□□□□ -1.32
HMGB3P31-201ENST00000413333 C9IYK1 514 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 WFS1O76024 890 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 ALX3O95076 343 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 CST3P01034 146 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 TKFCQ3LXA3 575 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 TAF7LQ5H9L4 462 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZSWIM2Q8NEG5 633 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 CYB5D2Q8WUJ1 264 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
HMGB3P31-201ENST00000413333 IQCA1LA6NCM1 817 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 AGRPO00253 132 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 GNB5O14775 395 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 SART1O43290 800 aaKnown RBP6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 TIAF1O95411 115 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 RAB6AP20340 208 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 ANAPC15P60006 121 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 TCEA2Q15560 299 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 GRIK4Q16099 956 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 PRRT3Q5FWE3 981 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 HEATR6Q6AI08 1181 aaKnown RBP6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 SHISA2Q6UWI4 295 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 KIAA0907Q7Z7F0 614 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 CCDC144CPQ8IYA2 1237 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 JMYQ8N9B5 988 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 C2CD4AQ8NCU7 369 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZCRB1Q8TBF4 217 aaKnown RBP6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 FEZ1Q99689 392 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 APBA2Q99767 749 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 FOXQ1Q9C009 403 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 EPN3Q9H201 632 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 LGR6Q9HBX8 967 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 PCOLCE2Q9UKZ9 415 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 PRKAB1Q9Y478 270 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 COL4A3BPQ9Y5P4 624 aa6.8□□□□□ -1.32
HMGB3P31-201ENST00000413333 EPHX1P07099 455 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 NAT2P11245 290 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 ELNP15502 786 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 USP11P51784 963 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 AXDND1Q5T1B0 1012 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 ANKRD34AQ69YU3 496 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 ADAT2Q7Z6V5 191 aaKnown RBP6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 FGD4Q96M96 766 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 MKRN2Q9H000 416 aaKnown RBP6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 MKL2Q9ULH7 1088 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
HMGB3P31-201ENST00000413333 ANKRD34BA5PLL1 514 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 F8W735 103 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 PIK3R2O00459 728 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 LRIG2O94898 1065 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 L1CAMP32004 1257 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 CAP2P40123 477 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 PREPP48147 710 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 TMEM67Q5HYA8 995 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 ARMCX6Q7L4S7 300 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 LRRN4CLQ8ND94 238 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 MIPEPQ99797 713 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 HAUS7Q99871 368 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 GSX1Q9H4S2 264 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 USP21Q9UK80 565 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 NOP58Q9Y2X3 529 aaKnown RBP6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 SUGT1Q9Y2Z0 365 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 DAGLAQ9Y4D2 1042 aa6.78□□□□□ -1.32
HMGB3P31-201ENST00000413333 A0A1W2PQU0 124 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 ADCY3O60266 1144 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 GLB1P16278 677 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 CDH24Q86UP0 819 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 MFSD2AQ8NA29 543 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 SMARCC1Q92922 1105 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 SGSM3Q96HU1 749 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 SLC26A8Q96RN1 970 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 CDC6Q99741 560 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 LGR4Q9BXB1 951 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms