RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 KCNG1Q9UIX4 513 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 RPS8P62241 208 aaKnown RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 FBXW10Q5XX13 1052 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 SDCCAG8Q86SQ7 713 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 PRPF38AQ8NAV1 312 aaKnown RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 LRRC27Q9C0I9 530 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 C6orf50Q9HD87 102 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 MROH5Q6ZUA9 1318 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 RTL1A6NKG5 1358 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 ARAP3Q8WWN8 1544 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 MTIF2P46199 727 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 IFT88Q13099 833 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 STXBP4Q6ZWJ1 553 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 SRGAP1Q7Z6B7 1085 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 RPGRIP1Q96KN7 1286 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 WDR17Q8IZU2 1322 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 TNNI2P48788 182 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 SIK1P57059 783 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 CUL3Q13618 768 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 PLEKHF1Q96S99 279 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 PAIP2BQ9ULR5 123 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 GPAA1O43292 621 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 ACTN3Q08043 901 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 NBPF10Q6P3W6 841 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 FCHSD1Q86WN1 690 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 RRP36Q96EU6 259 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 RMDN2Q96LZ7 410 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 ARMT1Q9H993 441 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 LARSQ9P2J5 1176 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 ABCC4O15439 1325 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 ERBB3P21860 1342 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 PTPDC1A2A3K4 754 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 CLTAP09496 248 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 TRIM21P19474 475 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 GNPTABQ3T906 1256 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 ACBD5Q5T8D3 534 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 FAM114A2Q9NRY5 505 aa9.47□□□□□ -0.89
PBRM1-209ENST00000412587 TTF2Q9UNY4 1162 aaKnown RBP9.47□□□□□ -0.89
PBRM1-209ENST00000412587 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 PPFIA2O75334 1257 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 PRR29P0C7W0 189 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 FAM160A1Q05DH4 1040 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 VPS36Q86VN1 386 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 MRPS27Q92552 414 aaKnown RBP9.46□□□□□ -0.89
PBRM1-209ENST00000412587 ASAP1Q9ULH1 1129 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 KIF1BO60333 1816 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 MAST3O60307 1309 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 CETN1Q12798 172 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 CASP8Q14790 479 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 TCERG1LQ5VWI1 586 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 RASEFQ8IZ41 740 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 CCDC63Q8NA47 563 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 ZKSCAN3Q9BRR0 538 aa9.46□□□□□ -0.89
PBRM1-209ENST00000412587 QTRT2Q9H974 415 aaKnown RBP9.46□□□□□ -0.89
PBRM1-209ENST00000412587 KDM5CP41229 1560 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 SGSM2O43147 1006 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 TBCAO75347 108 aaKnown RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 RXRAP19793 462 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 HPDP32754 393 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 CTSWP56202 376 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 FAM227BQ96M60 508 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 SAP30BPQ9UHR5 308 aaKnown RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 KDRP35968 1356 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 B4E1Z4 1266 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 CPA1P15085 419 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 MARCKSP29966 332 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 GKAP1Q5VSY0 366 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 FLAD1Q8NFF5 587 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 SSH3Q8TE77 659 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 MIEF2Q96C03 454 aa9.46□□□□□ -0.9
PBRM1-209ENST00000412587 STMN4Q9H169 189 aaPredicted RBP9.46□□□□□ -0.9
PBRM1-209ENST00000412587 SPDYE3A6NKU9 549 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 GNA11P29992 359 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 SESN3P58005 492 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
PBRM1-209ENST00000412587 PARP9Q8IXQ6 854 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 CCDC170Q8IYT3 715 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 ZBTB10Q96DT7 871 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 TTC14Q96N46 770 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 KIF9Q9HAQ2 790 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 KRT86O43790 486 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 ZAP70P43403 619 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 PSMD7P51665 324 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 SYCP3Q8IZU3 236 aa9.45□□□□□ -0.9
PBRM1-209ENST00000412587 ZBTB38Q8NAP3 1195 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms