RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 OTUD7BQ6GQQ9 843 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 FASTKD5Q7L8L6 764 aaKnown RBP18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 LOC285556D6RIA3 1793 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 NEDD1Q8NHV4 660 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 BEGAINQ9BUH8 593 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 ANO2Q9NQ90 1003 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 RNF186Q9NXI6 227 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
TRAPPC12-203ENST00000411973 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 BTBD19C9JJ37 291 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 TFAP4Q01664 338 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 ICA1Q05084 483 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 MTMR2Q13614 643 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 SIAH1Q8IUQ4 282 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 CFHR5Q9BXR6 569 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 KIAA1683Q9H0B3 1180 aa18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
TRAPPC12-203ENST00000411973 CYP21A2P08686 494 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 TSPY3P0CV98 308 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 TSPY8P0CW00 308 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 USP14P54578 494 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 HMGCS2P54868 508 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 FAM47AQ5JRC9 791 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 GPAT2Q6NUI2 795 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 ARHGEF10LQ9HCE6 1279 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 SLC45A1Q9Y2W3 748 aa18.28■□□□□ 0.52
TRAPPC12-203ENST00000411973 A0A1W2PRG0 241 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 TSPY2A6NKD2 308 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 TRPA1O75762 1119 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 HSPA1AP0DMV8 641 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 HSPA1BP0DMV9 641 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 SH2D4AQ9H788 454 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 EMILIN3Q9NT22 766 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 NYAP2Q9P242 653 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 TMX2Q9Y320 296 aa18.27■□□□□ 0.52
TRAPPC12-203ENST00000411973 MYH4Q9Y623 1939 aa18.27■□□□□ 0.51
TRAPPC12-203ENST00000411973 NEDD4P46934 1319 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 EEF2P13639 858 aaKnown RBP18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 NECTIN1Q15223 517 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 GADL1Q6ZQY3 521 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 MKL1Q969V6 931 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 FEZ1Q99689 392 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 CNNM2Q9H8M5 875 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 TMOD4Q9NZQ9 345 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 AGTPBP1Q9UPW5 1226 aa18.26■□□□□ 0.51
TRAPPC12-203ENST00000411973 EPB41L2O43491 1005 aaKnown RBP18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 REC8O95072 547 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 NOVP48745 357 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 PPP4R3BQ5MIZ7 849 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 ESR2Q92731 530 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 KRT23Q9C075 422 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 IL17RBQ9NRM6 502 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 TCP11L1Q9NUJ3 509 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 SYNPO2Q9UMS6 1093 aa18.25■□□□□ 0.51
TRAPPC12-203ENST00000411973 PDHXO00330 501 aa18.24■□□□□ 0.51
TRAPPC12-203ENST00000411973 TTLL1O95922 423 aa18.24■□□□□ 0.51
TRAPPC12-203ENST00000411973 DGKZQ13574 1117 aa18.24■□□□□ 0.51
TRAPPC12-203ENST00000411973 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
TRAPPC12-203ENST00000411973 NKX2-3Q8TAU0 364 aa18.24■□□□□ 0.51
TRAPPC12-203ENST00000411973 SLC27A2O14975 620 aa18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 FOXN1O15353 648 aa18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 PABPC4Q13310 644 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 TAF1CQ15572 869 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 NOM1Q5C9Z4 860 aaKnown RBP18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 LPAR1Q92633 364 aa18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
TRAPPC12-203ENST00000411973 B4E1Z4 1266 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 E7EWF7 191 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 KDM4AO75164 1064 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 ATP2B2Q01814 1243 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 TRDNQ13061 729 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 CRHR2Q13324 411 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 ZYXQ15942 572 aaKnown RBP18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 ZFYVE28Q9HCC9 887 aa18.22■□□□□ 0.51
TRAPPC12-203ENST00000411973 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms