RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 RAI14Q9P0K7 980 aa27.28■■□□□ 1.96
PMS1-205ENST00000409985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.27■■□□□ 1.96
PMS1-205ENST00000409985 CT47A1Q5JQC4 288 aaPredicted RBP27.27■■□□□ 1.96
PMS1-205ENST00000409985 CLIC6Q96NY7 704 aa27.27■■□□□ 1.96
PMS1-205ENST00000409985 HSD3B7Q9H2F3 369 aa27.27■■□□□ 1.96
PMS1-205ENST00000409985 BMP15O95972 392 aa27.27■■□□□ 1.96
PMS1-205ENST00000409985 DACH1Q9UI36 760 aa27.27■■□□□ 1.96
PMS1-205ENST00000409985 MINPP1Q9UNW1 487 aa27.27■■□□□ 1.96
PMS1-205ENST00000409985 TNKSO95271 1327 aa27.27■■□□□ 1.96
PMS1-205ENST00000409985 TAF1P21675 1872 aa27.26■■□□□ 1.95
PMS1-205ENST00000409985 PRPF3O43395 683 aaKnown RBP27.26■■□□□ 1.95
PMS1-205ENST00000409985 SFPQP23246 707 aaKnown RBP eCLIP27.26■■□□□ 1.95
PMS1-205ENST00000409985 FBXO33Q7Z6M2 555 aa27.26■■□□□ 1.95
PMS1-205ENST00000409985 ADGRA1Q86SQ6 560 aa27.26■■□□□ 1.95
PMS1-205ENST00000409985 FBXW7Q969H0 707 aa27.26■■□□□ 1.95
PMS1-205ENST00000409985 ZSCAN10Q96SZ4 725 aaPredicted RBP27.26■■□□□ 1.95
PMS1-205ENST00000409985 NPHP1O15259 732 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 CCP110O43303 1012 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 PNOCQ13519 176 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 ZKSCAN3Q9BRR0 538 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 COL1A1P02452 1464 aaPredicted RBP27.25■■□□□ 1.95
PMS1-205ENST00000409985 AKAP17AQ02040 695 aaKnown RBP27.25■■□□□ 1.95
PMS1-205ENST00000409985 TMC6Q7Z403 805 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 MLKLQ8NB16 471 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 CCDC34Q96HJ3 373 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 FAM84BQ96KN1 310 aaPredicted RBP27.25■■□□□ 1.95
PMS1-205ENST00000409985 ABCF2Q9UG63 623 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 PCDHA5Q9Y5H7 936 aa27.25■■□□□ 1.95
PMS1-205ENST00000409985 DDAH1O94760 285 aa27.24■■□□□ 1.95
PMS1-205ENST00000409985 SARSP49591 514 aaKnown RBP27.24■■□□□ 1.95
PMS1-205ENST00000409985 IQCA1Q86XH1 822 aa27.24■■□□□ 1.95
PMS1-205ENST00000409985 KCNJ14Q9UNX9 436 aa27.24■■□□□ 1.95
PMS1-205ENST00000409985 GYG1P46976 350 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 ST5P78524 1137 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 FUT2Q10981 343 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 ARMCX5Q6P1M9 558 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 CATIPQ7Z7H3 387 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 KLRG2A4D1S0 409 aaPredicted RBP27.23■■□□□ 1.95
PMS1-205ENST00000409985 MINDY4BA8MYZ0 360 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 UBE2Q2LH0YL09 131 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 ORC4O43929 436 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 FOXP4Q8IVH2 680 aaPredicted RBP27.23■■□□□ 1.95
PMS1-205ENST00000409985 ENAHQ8N8S7 591 aaPredicted RBP27.23■■□□□ 1.95
PMS1-205ENST00000409985 SDR42E1Q8WUS8 393 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 ANKRD2Q9GZV1 360 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 C10orf71Q711Q0 1435 aa27.23■■□□□ 1.95
PMS1-205ENST00000409985 MYH6P13533 1939 aa27.22■■□□□ 1.95
PMS1-205ENST00000409985 COL11A2P13942 1736 aaPredicted RBP27.22■■□□□ 1.95
PMS1-205ENST00000409985 LMOD1P29536 600 aaPredicted RBP27.22■■□□□ 1.95
PMS1-205ENST00000409985 POSTNQ15063 836 aa27.22■■□□□ 1.95
PMS1-205ENST00000409985 PHF20Q9BVI0 1012 aa27.22■■□□□ 1.95
PMS1-205ENST00000409985 UBASH3AP57075 661 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 CRY2Q49AN0 593 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 SPATA20Q8TB22 786 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 NUP133Q8WUM0 1156 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 AATFQ9NY61 560 aaKnown RBP eCLIP27.21■■□□□ 1.95
PMS1-205ENST00000409985 UTRNP46939 3433 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 KIF18AQ8NI77 898 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 TSC1Q92574 1164 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 NLRP3Q96P20 1036 aa27.21■■□□□ 1.95
PMS1-205ENST00000409985 USP27XA6NNY8 438 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 PKN1Q16512 942 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 IFIT1BQ5T764 474 aaKnown RBP27.2■■□□□ 1.94
PMS1-205ENST00000409985 SLC51AQ86UW1 340 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 PDCL2Q8N4E4 241 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 ENOX1Q8TC92 643 aaKnown RBP27.2■■□□□ 1.94
PMS1-205ENST00000409985 ATP8A2Q9NTI2 1148 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.2■■□□□ 1.94
PMS1-205ENST00000409985 KIF13BQ9NQT8 1826 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 MAST2Q6P0Q8 1798 aa27.2■■□□□ 1.94
PMS1-205ENST00000409985 TRIM75PA6NK02 468 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 KRT2P35908 639 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 SBK1Q52WX2 424 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 FCHSD1Q86WN1 690 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 VSTM4Q8IW00 320 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 FERMT2Q96AC1 680 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 PCDHB6Q9Y5E3 794 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 SERPINC1P01008 464 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 POLD1P28340 1107 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 TROAPQ12815 778 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 MORC3Q14149 939 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 E4F1Q66K89 784 aaPredicted RBP27.19■■□□□ 1.94
PMS1-205ENST00000409985 CTR9Q6PD62 1173 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 NSUN4Q96CB9 384 aaKnown RBP27.19■■□□□ 1.94
PMS1-205ENST00000409985 TMX1Q9H3N1 280 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 BRMS1Q9HCU9 246 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 MAN1B1Q9UKM7 699 aa27.19■■□□□ 1.94
PMS1-205ENST00000409985 RPS8P62241 208 aaKnown RBP27.18■■□□□ 1.94
PMS1-205ENST00000409985 NR5A1Q13285 461 aa27.18■■□□□ 1.94
PMS1-205ENST00000409985 SMARCE1Q969G3 411 aa27.18■■□□□ 1.94
PMS1-205ENST00000409985 SPON1Q9HCB6 807 aa27.18■■□□□ 1.94
PMS1-205ENST00000409985 ERCC5P28715 1186 aaPredicted RBP27.17■■□□□ 1.94
PMS1-205ENST00000409985 NCBP1Q09161 790 aaKnown RBP27.17■■□□□ 1.94
PMS1-205ENST00000409985 IQSEC3Q9UPP2 1182 aaPredicted RBP27.17■■□□□ 1.94
PMS1-205ENST00000409985 KIAA1551Q9HCM1 1747 aa27.17■■□□□ 1.94
PMS1-205ENST00000409985 LAMB1P07942 1786 aa27.17■■□□□ 1.94
PMS1-205ENST00000409985 POLR2DO15514 142 aaKnown RBP27.17■■□□□ 1.94
PMS1-205ENST00000409985 ACTN4O43707 911 aaKnown RBP27.17■■□□□ 1.94
PMS1-205ENST00000409985 ATP1A3P13637 1013 aa27.17■■□□□ 1.94
PMS1-205ENST00000409985 ZNF384Q8TF68 577 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms