RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, human

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-204	ENST00000405570	CCDC196	A0A1B0GTZ2	297 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	ENC1	O14682	589 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	MYCN	P04198	464 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	INPP5B	P32019	993 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	CDKAL1	Q5VV42	579 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	COPS6	Q7L5N1	327 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	GSPT2	Q8IYD1	628 aa	Known RBP	11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	CNPY4	Q8N129	248 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	SLF1	Q9BQI6	1058 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	TRIM10	Q9UDY6	481 aa		11.29	□□□□□ -0.6
CTNNB1-204	ENST00000405570	SIPA1L3	O60292	1781 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	NWD2	Q9ULI1	1742 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	GRIN2D	O15399	1336 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	TARSL2	A2RTX5	802 aa	Known RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	UBE2Q2L	H0YL09	131 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	ACTN4	O43707	911 aa	Known RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	CD44	P16070	742 aa	Known RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	USP8	P40818	1118 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	TRDN	Q13061	729 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	PPFIA1	Q13136	1202 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	KLHL10	Q6JEL2	608 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	EP400NL	Q6ZTU2	488 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	RALYL	Q86SE5	291 aa	Known RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	BANK1	Q8NDB2	785 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	SELENOO	Q9BVL4	669 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	CAPS2	Q9BXY5	557 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	FBXO2	Q9UK22	296 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	SUFU	Q9UMX1	484 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	C4A	P0C0L4	1744 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	C4B	P0C0L5	1744 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	EIF3H	O15372	352 aa	Known RBP eCLIP	11.28	□□□□□ -0.6	3e-6	■■■■□ 20.7
CTNNB1-204	ENST00000405570	SNRPA1	P09661	255 aa	Known RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	PTPRE	P23469	700 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	CDC25A	P30304	524 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	METAP2	P50579	478 aa	Known RBP eCLIP	11.28	□□□□□ -0.6	6e-8	■■■□□ 15.2
CTNNB1-204	ENST00000405570	TOB1	P50616	345 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	CUL4B	Q13620	913 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	ATG9A	Q7Z3C6	839 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	POTED	Q86YR6	584 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	PRPF38A	Q8NAV1	312 aa	Known RBP	11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	NKX2-3	Q8TAU0	364 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	ABHD10	Q9NUJ1	306 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	DENND2A	Q9ULE3	1009 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	GUCA1B	Q9UMX6	200 aa		11.28	□□□□□ -0.6
CTNNB1-204	ENST00000405570	SCN11A	Q9UI33	1791 aa		11.27	□□□□□ -0.6
CTNNB1-204	ENST00000405570	PKD1L3	Q7Z443	1732 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	PSMD14	O00487	310 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SRGAP2	O75044	1071 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	IFIT1	P09914	478 aa	Known RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	NBPF14	Q5TI25	921 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CYP26C1	Q6V0L0	522 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CTAGE1	Q96RT6	745 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	REXO2	Q9Y3B8	237 aa	Known RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ITIH6	Q6UXX5	1313 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SYNRG	Q9UMZ2	1314 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	GOLGA6B	A6NDN3	693 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	NUTM2E	B1AL46	878 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	PTCD1	O75127	700 aa	Known RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CDKL5	O76039	1030 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ATP1A1	P05023	1023 aa	Known RBP	11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	FILIP1L	Q4L180	1135 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	LMBR1L	Q6UX01	489 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	USP49	Q70CQ1	688 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SAMM50	Q9Y512	469 aa		11.27	□□□□□ -0.61
CTNNB1-204	ENST00000405570	WDR19	Q8NEZ3	1342 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	MYH8	P13535	1937 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SHTN1	A0MZ66	631 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	RANBP6	O60518	1105 aa	Known RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	GNGT1	P63211	74 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	TRIM29	Q14134	588 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	NKX1-1	Q15270	411 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	NTRK3	Q16288	839 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	WASHC4	Q2M389	1173 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	NOSTRIN	Q8IVI9	506 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CAPZA3	Q96KX2	299 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SH3GL2	Q99962	352 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SENP2	Q9HC62	589 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ANGEL1	Q9UNK9	670 aa	Known RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	SAR1B	Q9Y6B6	198 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	UBN2	Q6ZU65	1347 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ERVV-2	B6SEH9	535 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	KIF1C	O43896	1103 aa	Known RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CCT6A	P40227	531 aa	Known RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	FNTA	P49354	379 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	TTC19	Q6DKK2	380 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	KANK3	Q6NY19	840 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	APOA5	Q6Q788	366 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ANKRD13D	Q6ZTN6	518 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CHP1	Q99653	195 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	JPH2	Q9BR39	696 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	CAPN7	Q9Y6W3	813 aa		11.26	□□□□□ -0.61
CTNNB1-204	ENST00000405570	DDX60	Q8IY21	1712 aa	Known RBP	11.25	□□□□□ -0.61
CTNNB1-204	ENST00000405570		A0A087WZG4	1122 aa		11.25	□□□□□ -0.61
CTNNB1-204	ENST00000405570	BTBD18	B2RXH4	712 aa		11.25	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ATP5J2-PTCD1	G3V325	749 aa		11.25	□□□□□ -0.61
CTNNB1-204	ENST00000405570	MYO1F	O00160	1098 aa		11.25	□□□□□ -0.61
CTNNB1-204	ENST00000405570	ZNF213	O14771	459 aa		11.25	□□□□□ -0.61
CTNNB1-204	ENST00000405570	IARS	P41252	1262 aa	Known RBP	11.25	□□□□□ -0.61

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