RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 LTBP3Q9NS15 1303 aa27.07■■□□□ 1.92
TRIOBP-203ENST00000403663 ECM29Q5VYK3 1845 aa27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 VIL1P09327 827 aaKnown RBP27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 USP5P45974 858 aa27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 APOBEC3HQ6NTF7 200 aaKnown RBP27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 RSBN1LQ6PCB5 846 aaPredicted RBP27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 ATP8A2Q9NTI2 1148 aa27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 TEX11Q8IYF3 940 aa27.06■■□□□ 1.92
TRIOBP-203ENST00000403663 HHIPL2Q6UWX4 724 aa27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 JAK2O60674 1132 aa27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 ARHGAP27Q6ZUM4 889 aa27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 CREBRFQ8IUR6 639 aa27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 DHX40Q8IX18 779 aaKnown RBP27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 MB21D2Q8IYB1 491 aaPredicted RBP27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 JDP2Q8WYK2 163 aa27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 GMLQ99445 158 aa27.05■■□□□ 1.92
TRIOBP-203ENST00000403663 DDX60LQ5H9U9 1706 aaKnown RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 MYH1P12882 1939 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 ERICH4A6NGS2 130 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 EXOSC10Q01780 885 aaKnown RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 DHX32Q7L7V1 743 aaKnown RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 GPHNQ9NQX3 736 aaPredicted RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 MCM9Q9NXL9 1143 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 BECN2A8MW95 431 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 B4E1Z4 1266 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 KIF2AO00139 706 aaPredicted RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 CTAGE5O15320 804 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 SBF1O95248 1867 aa27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 H2AFXP16104 143 aaPredicted RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 YBX3P16989 372 aaKnown RBP eCLIP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 SAP30BPQ9UHR5 308 aaKnown RBP27.04■■□□□ 1.92
TRIOBP-203ENST00000403663 ANTXR2P58335 489 aa27.03■■□□□ 1.92
TRIOBP-203ENST00000403663 CDC42EP5Q6NZY7 148 aa27.03■■□□□ 1.92
TRIOBP-203ENST00000403663 Q6ZUG5 572 aa27.03■■□□□ 1.92
TRIOBP-203ENST00000403663 BRF1Q92994 677 aa27.03■■□□□ 1.92
TRIOBP-203ENST00000403663 CFAP45Q9UL16 551 aa27.03■■□□□ 1.92
TRIOBP-203ENST00000403663 RBM5P52756 815 aaKnown RBP eCLIP27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 AKNAD1Q5T1N1 836 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 CYB5R4Q7L1T6 521 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 DDX11Q96FC9 970 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 ZDHHC15Q96MV8 337 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 L2HGDHQ9H9P8 463 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 NCOA7Q8NI08 942 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 DDX4Q9NQI0 724 aaKnown RBP27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 USP40Q9NVE5 1235 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 CALCOCO1Q9P1Z2 691 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 FLT1P17948 1338 aa27.02■■□□□ 1.92
TRIOBP-203ENST00000403663 BMS1Q14692 1282 aaKnown RBP27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 GTF3C6Q969F1 213 aa27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 ZSCAN16Q9H4T2 348 aaPredicted RBP27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 ANAPC4Q9UJX5 808 aa27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 SHTN1A0MZ66 631 aa27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 WDHD1O75717 1129 aaPredicted RBP27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 CACNB3P54284 484 aa27.01■■□□□ 1.91
TRIOBP-203ENST00000403663 HMGB1P09429 215 aaKnown RBP27■■□□□ 1.91
TRIOBP-203ENST00000403663 PLCG2P16885 1265 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 PICALMQ13492 652 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 RRP12Q5JTH9 1297 aaKnown RBP27■■□□□ 1.91
TRIOBP-203ENST00000403663 RALYLQ86SE5 291 aaKnown RBP27■■□□□ 1.91
TRIOBP-203ENST00000403663 STAG1Q8WVM7 1258 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 ERCC6LQ2NKX8 1250 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 CIAPIN1Q6FI81 312 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 MFSD6Q6ZSS7 791 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 SERPINA10Q9UK55 444 aa27■■□□□ 1.91
TRIOBP-203ENST00000403663 PRDM1O75626 825 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 GSDMDP57764 484 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 NFIAQ12857 509 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 CCAR1Q8IX12 1150 aaKnown RBP26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 GOLPH3LQ9H4A5 285 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 FHOD1Q9Y613 1164 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 DICER1Q9UPY3 1922 aaKnown RBP26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 A0A087WWV3 80 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 PRC1O43663 620 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 PLCD1P51178 756 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 HDLBPQ00341 1268 aaKnown RBP26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 SNW1Q13573 536 aaKnown RBP26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 CFAP100Q494V2 611 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 MRIQ9BWK5 157 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 TOMM22Q9NS69 142 aa26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 ARPP21Q9UBL0 812 aaPredicted RBP26.99■■□□□ 1.91
TRIOBP-203ENST00000403663 H3BQV1 296 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 CYP2C19P33261 490 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 ADD1P35611 737 aaKnown RBP26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 CEBPZQ03701 1054 aaKnown RBP26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 SBK1Q52WX2 424 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 IFFO2Q5TF58 517 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 E4F1Q66K89 784 aaPredicted RBP26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 PRMT6Q96LA8 375 aaPredicted RBP26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 OSBPL5Q9H0X9 879 aaPredicted RBP26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 MYO3BQ8WXR4 1341 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 TRDNQ13061 729 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 C12orf60Q5U649 245 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 NBPF11Q86T75 865 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 CERS3Q8IU89 383 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 DYNLL2Q96FJ2 89 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 ANO10Q9NW15 660 aa26.98■■□□□ 1.91
TRIOBP-203ENST00000403663 TULP2O00295 520 aa26.97■■□□□ 1.91
TRIOBP-203ENST00000403663 CDK11BP21127 795 aaKnown RBP26.97■■□□□ 1.91
TRIOBP-203ENST00000403663 ZSWIM5Q9P217 1185 aa26.97■■□□□ 1.91
TRIOBP-203ENST00000403663 ZNF541Q9H0D2 1346 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms