RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
SCFD2-202ENST00000401642 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 INTS13Q9NVM9 706 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 USP17L3A6NCW0 530 aa12.65□□□□□ -0.39
SCFD2-202ENST00000401642 USP17L4A6NCW7 530 aa12.65□□□□□ -0.39
SCFD2-202ENST00000401642 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.39
SCFD2-202ENST00000401642 HIBADHP31937 336 aaKnown RBP12.65□□□□□ -0.39
SCFD2-202ENST00000401642 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.39
SCFD2-202ENST00000401642 SRBD1Q8N5C6 995 aaKnown RBP12.65□□□□□ -0.39
SCFD2-202ENST00000401642 RIOK1Q9BRS2 568 aaKnown RBP12.65□□□□□ -0.39
SCFD2-202ENST00000401642 A0A0U1RQJ8 604 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
SCFD2-202ENST00000401642 TOGARAM2Q6ZUX3 1019 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 MNS1Q8NEH6 495 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 ATRIPQ8WXE1 791 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 RAD21O60216 631 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 ERCC3P19447 782 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 PKN1Q16512 942 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 KMT5BQ4FZB7 885 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 ANKRD7Q92527 254 aa12.64□□□□□ -0.39
SCFD2-202ENST00000401642 PP2D1A8MPX8 630 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 TFAP4Q01664 338 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 SEC23AQ15436 765 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 FBXO38Q6PIJ6 1188 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 STAG2Q8N3U4 1231 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 CARD6Q9BX69 1037 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 VPS16Q9H269 839 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 FOXP1Q9H334 677 aaPredicted RBP12.63□□□□□ -0.39
SCFD2-202ENST00000401642 BRMS1Q9HCU9 246 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
SCFD2-202ENST00000401642 IMPACTQ9P2X3 320 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 TAF1P21675 1872 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
SCFD2-202ENST00000401642 GRIK5Q16478 980 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 TTC38Q5R3I4 469 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 TICAM2Q86XR7 235 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 MAPKAPK5Q8IW41 473 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 BAG1Q99933 345 aaPredicted RBP12.63□□□□□ -0.39
SCFD2-202ENST00000401642 CTNND2Q9UQB3 1225 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 IKBKBO14920 756 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 VSTM4Q8IW00 320 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 TGFBRAP1Q8WUH2 860 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 MED15Q96RN5 788 aa12.63□□□□□ -0.39
SCFD2-202ENST00000401642 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
SCFD2-202ENST00000401642 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 UBR2Q8IWV8 1755 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 RRAGBQ5VZM2 374 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
SCFD2-202ENST00000401642 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
SCFD2-202ENST00000401642 CGNQ9P2M7 1197 aaKnown RBP12.62□□□□□ -0.39
SCFD2-202ENST00000401642 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 SRPRBQ9Y5M8 271 aaKnown RBP12.62□□□□□ -0.39
SCFD2-202ENST00000401642 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
SCFD2-202ENST00000401642 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
SCFD2-202ENST00000401642 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
SCFD2-202ENST00000401642 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 MDM2Q00987 491 aaPredicted RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 TROAPQ12815 778 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 TEX35Q5T0J7 233 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 COL4A1P02462 1669 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 ACTN4O43707 911 aaKnown RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 NFIXQ14938 502 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 WDR24Q96S15 920 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 TFRCP02786 760 aaKnown RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 UTP14CQ5TAP6 766 aaKnown RBP12.61□□□□□ -0.39
SCFD2-202ENST00000401642 PPP2R2CQ9Y2T4 447 aa12.61□□□□□ -0.39
SCFD2-202ENST00000401642 RTL9Q8NET4 1388 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 ATRNO75882 1429 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 COL1A1P02452 1464 aaPredicted RBP12.6□□□□□ -0.39
SCFD2-202ENST00000401642 ETF1P62495 437 aaKnown RBP12.6□□□□□ -0.39
SCFD2-202ENST00000401642 CUL4BQ13620 913 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 PPFIBP1Q86W92 1011 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 SH3RF3Q8TEJ3 882 aaPredicted RBP12.6□□□□□ -0.39
SCFD2-202ENST00000401642 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
SCFD2-202ENST00000401642 TAB2Q9NYJ8 693 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 NUP98P52948 1817 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 SPECC1LQ69YQ0 1117 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 IGSF22Q8N9C0 903 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 UBXN4Q92575 508 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
SCFD2-202ENST00000401642 ZNF804BA4D1E1 1349 aa12.6□□□□□ -0.39
SCFD2-202ENST00000401642 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
SCFD2-202ENST00000401642 FANCGO15287 622 aa12.59□□□□□ -0.39
SCFD2-202ENST00000401642 SEC31AO94979 1220 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms