RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 HAND2P61296 217 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 KCNG4Q8TDN1 519 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SH3RF3Q8TEJ3 882 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ZNF213O14771 459 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 LMOD1P29536 600 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 EPS15P42566 896 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CDC42EP5Q6NZY7 148 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 FMR1NBQ8N0W7 255 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 FBXO18Q8NFZ0 1043 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 NAT10Q9H0A0 1025 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 GPHNQ9NQX3 736 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 HPS5Q9UPZ3 1129 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
CHRFAM7A-203ENST00000401522 BECN2A8MW95 431 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 WNT10BO00744 389 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 NEMFO60524 1076 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 EGFRP00533 1210 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ANTXR2P58335 489 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CEP57L1Q8IYX8 460 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 POLR3EQ9NVU0 708 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ORC3Q9UBD5 711 aaPredicted RBP18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 NRBP1Q9UHY1 535 aa18.38■□□□□ 0.53
CHRFAM7A-203ENST00000401522 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CPLX1O14810 134 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 PRKAB2O43741 272 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 STK38Q15208 465 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 LINC00301Q8NCQ3 95 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 LRMPQ12912 555 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 TDRD3Q9H7E2 651 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ADARB2Q9NS39 739 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
CHRFAM7A-203ENST00000401522 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SF3A1Q15459 793 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 NBPF9Q3BBW0 867 aa18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 TBC1D10BQ4KMP7 808 aaPredicted RBP18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 RBM26Q5T8P6 1007 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 DHX40Q8IX18 779 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 MKRN1Q9UHC7 482 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 HACL1Q9UJ83 578 aa18.36■□□□□ 0.53
CHRFAM7A-203ENST00000401522 MYO1BO43795 1136 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 TRDNQ13061 729 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ALX1Q15699 326 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 IFNL3Q8IZI9 196 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 WDR90Q96KV7 1748 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 IDI2Q9BXS1 227 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SCN4AP35499 1836 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 IQCA1LA6NCM1 817 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 POTECB2RU33 542 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 APPP05067 770 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 TGFBRAP1Q8WUH2 860 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SDF4Q9BRK5 362 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 NACAP1Q9BZK3 213 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 DCP1AQ9NPI6 582 aaPredicted RBP18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 RIOK3O14730 519 aaKnown RBP18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SPTLC2O15270 562 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 USP5P45974 858 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 HIRAP54198 1017 aaPredicted RBP18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CCDC144BQ3MJ40 725 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 TRPM4Q8TD43 1214 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 EPB41L4AQ9HCS5 686 aaPredicted RBP18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ECM29Q5VYK3 1845 aa18.34■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CDKL5O76039 1030 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 FKBP1CQ5VVH2 108 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 SYNE3Q6ZMZ3 975 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ZNF710Q8N1W2 664 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 BPIFA3Q9BQP9 254 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 ANGEL1Q9UNK9 670 aaKnown RBP18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 CDK5RAP2Q96SN8 1893 aa18.33■□□□□ 0.53
CHRFAM7A-203ENST00000401522 EPHX2P34913 555 aa18.33■□□□□ 0.52
CHRFAM7A-203ENST00000401522 NDUFA8P51970 172 aa18.33■□□□□ 0.52
CHRFAM7A-203ENST00000401522 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.52
CHRFAM7A-203ENST00000401522 USP50Q70EL3 339 aaPredicted RBP18.33■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TMOD2Q9NZR1 351 aa18.33■□□□□ 0.52
CHRFAM7A-203ENST00000401522 FOCADQ5VW36 1801 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 FLT1P17948 1338 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 A0A1B0GVL5 298 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CACNB3P54284 484 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 NFIAQ12857 509 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ZRSR1Q15695 479 aaKnown RBP18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ANO1Q5XXA6 986 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 LRRC8AQ8IWT6 810 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms