RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 ORC4O43929 436 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 SYKP43405 635 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 GRIN1Q05586 938 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 KIAA2012Q0VF49 1180 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL25A1-202ENST00000399127 RNF26Q9BY78 433 aaPredicted RBP13.54□□□□□ -0.24
COL25A1-202ENST00000399127 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 PCDHB6Q9Y5E3 794 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
COL25A1-202ENST00000399127 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 PPP6R2O75170 966 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 ZNF75DP51815 510 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 ZRSR1Q15695 479 aaKnown RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 DHX37Q8IY37 1157 aaKnown RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 AOPEPQ8N6M6 819 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 KCNF1Q9H3M0 494 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 KIAA1551Q9HCM1 1747 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 DYNC1I1O14576 645 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 PTGS1P23219 599 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 HOXA10P31260 410 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 PDE6BP35913 854 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 TFAP4Q01664 338 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 SBK1Q52WX2 424 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 C12orf60Q5U649 245 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 DHX40Q8IX18 779 aaKnown RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 CEP57L1Q8IYX8 460 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 MKRN1Q9UHC7 482 aaKnown RBP13.53□□□□□ -0.24
COL25A1-202ENST00000399127 LAMB1P07942 1786 aa13.53□□□□□ -0.24
COL25A1-202ENST00000399127 RIMBP2O15034 1052 aa13.52□□□□□ -0.24
COL25A1-202ENST00000399127 SRGNP10124 158 aa13.52□□□□□ -0.24
COL25A1-202ENST00000399127 PLCD1P51178 756 aa13.52□□□□□ -0.24
COL25A1-202ENST00000399127 EARS2Q5JPH6 523 aaKnown RBP13.52□□□□□ -0.24
COL25A1-202ENST00000399127 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.24
COL25A1-202ENST00000399127 SRBD1Q8N5C6 995 aaKnown RBP13.52□□□□□ -0.24
COL25A1-202ENST00000399127 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.24
COL25A1-202ENST00000399127 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.24
COL25A1-202ENST00000399127 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.24
COL25A1-202ENST00000399127 KLRG2A4D1S0 409 aaPredicted RBP13.52□□□□□ -0.25
COL25A1-202ENST00000399127 USP17L3A6NCW0 530 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 USP17L4A6NCW7 530 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 CAVIN2O95810 425 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 BAG3O95817 575 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 VEGFAP15692 232 aaPredicted RBP13.52□□□□□ -0.25
COL25A1-202ENST00000399127 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 NOM1Q5C9Z4 860 aaKnown RBP13.52□□□□□ -0.25
COL25A1-202ENST00000399127 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 RCSD1Q6JBY9 416 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 USP17L1Q7RTZ2 530 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 PLA2G4DQ86XP0 818 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 SECISBP2LQ93073 1101 aaKnown RBP13.52□□□□□ -0.25
COL25A1-202ENST00000399127 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 IL17RBQ9NRM6 502 aa13.52□□□□□ -0.25
COL25A1-202ENST00000399127 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 NPR1P16066 1061 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 BTDP43251 543 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 GSTO1P78417 241 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 PNOCQ13519 176 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 CCDC186Q7Z3E2 898 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 KRI1Q8N9T8 703 aaKnown RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 RTFDC1Q9BY42 306 aaPredicted RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 HPSEQ9Y251 543 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 ZBTB22O15209 634 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 DDAH1O94760 285 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 CALM1P0DP23 149 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 CALM2P0DP24 149 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 CALM3P0DP25 149 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
COL25A1-202ENST00000399127 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
COL25A1-202ENST00000399127 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 CUTAO60888 179 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
COL25A1-202ENST00000399127 XBP1P17861 261 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 KCNH3Q9ULD8 1083 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 PYCARDQ9ULZ3 195 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 GOLGA6L6A8MZA4 724 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
COL25A1-202ENST00000399127 WNT7AO00755 349 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 FOXN1O15353 648 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 KRT2P35908 639 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 LRMPQ12912 555 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 PDILTQ8N807 584 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms