RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 THRAP3Q9Y2W1 955 aaKnown RBP15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 KLRF2D3W0D1 207 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 CYP26C1Q6V0L0 522 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 ERO1AQ96HE7 468 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 KRT9P35527 623 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 DLGAP5Q15398 846 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 VWA3BQ502W6 1294 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 TMTC1Q8IUR5 882 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 XPO4Q9C0E2 1151 aaKnown RBP15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 RNF26Q9BY78 433 aaPredicted RBP15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 BTDP43251 543 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 TRIML1Q8N9V2 468 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 CARMIL3Q8ND23 1372 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 PUS7LQ9H0K6 701 aaKnown RBP15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 DNM3Q9UQ16 869 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 SLC39A14Q15043 492 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 PICK1Q9NRD5 415 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 TAB2Q9NYJ8 693 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 CALCOCO1Q9P1Z2 691 aa15.92■□□□□ 0.14
PCDHGA11-201ENST00000398587 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 MAP2K1Q02750 393 aaPredicted RBP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 RAPGEF1Q13905 1077 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 NCAPH2Q6IBW4 605 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 KRBA2Q6ZNG9 492 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 TRMT44Q8IYL2 757 aaKnown RBP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 CHMP2AO43633 222 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 ACTN2P35609 894 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 ZYXQ15942 572 aaKnown RBP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 FAM196AQ6ZSG2 479 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 NELFBQ8WX92 580 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 NT5C3AQ9H0P0 336 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 GJA3Q9Y6H8 435 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 LMAN1P49257 510 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 TUBB2AQ13885 445 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 SPECC1LQ69YQ0 1117 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 HOOK2Q96ED9 719 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 TUBB2BQ9BVA1 445 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 PKD2L1Q9P0L9 805 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 ARHGEF35A5YM69 484 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 GTF2F1P35269 517 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 SMC1AQ14683 1233 aaKnown RBP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 CLEC4GQ6UXB4 293 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 CCDC84Q86UT8 332 aaPredicted RBP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 CAPZA3Q96KX2 299 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
PCDHGA11-201ENST00000398587 MCTP2Q6DN12 878 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 DYMQ7RTS9 669 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 TMC4Q7Z404 712 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 SYNCQ9H7C4 482 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 CLIC4Q9Y696 253 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 SETD1BQ9UPS6 1966 aaKnown RBP15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 NDUFA8P51970 172 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 BLZF1Q9H2G9 400 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 FOXP1Q9H334 677 aaPredicted RBP15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 RASAL2Q9UJF2 1139 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 RCOR1Q9UKL0 485 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 DKC1O60832 514 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 SP4Q02446 784 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 MICALCLQ6ZW33 695 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 BBOX1O75936 387 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 CCDC91Q7Z6B0 441 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 BIN2Q9UBW5 565 aaPredicted RBP15.9■□□□□ 0.14
PCDHGA11-201ENST00000398587 TNS3Q68CZ2 1445 aa15.89■□□□□ 0.14
PCDHGA11-201ENST00000398587 CALUO43852 315 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 INF2Q27J81 1249 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 C17orf53Q8N3J3 647 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 CHURC1Q8WUH1 139 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 DDX12PQ92771 950 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 MRFAP1L1Q96HT8 127 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 FAM107BQ9H098 131 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 PTPRUQ92729 1446 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 FSD2A1L4K1 749 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 CFBP00751 764 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 SMTNP53814 917 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 EVCP57679 992 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 USH1GQ495M9 461 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 NAPGQ99747 312 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 LARGE1O95461 756 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 IFNAR1P17181 557 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 NEK8Q86SG6 692 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCDHGA11-201ENST00000398587 FMNL1O95466 1100 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 LIFRP42702 1097 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 PPP6R2O75170 966 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 TERF1P54274 439 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 RASGRF1Q13972 1273 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 HLFQ16534 295 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 LCORLQ8N3X6 602 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms