RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TM4SF4P48230 202 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 TNNI2P48788 182 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 TNFAIP1Q13829 316 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 SPRYD7Q5W111 196 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 NOL8Q76FK4 1167 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 TMEM87BQ96K49 555 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 LARP6Q9BRS8 491 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 R3HDMLQ9H3Y0 253 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 DNAJC18Q9H819 358 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 MKNK2Q9HBH9 465 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 GPHNQ9NQX3 736 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 SWAP70Q9UH65 585 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 TAOK2Q9UL54 1235 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 LIMCH1Q9UPQ0 1083 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 CASP8AP2Q9UKL3 1982 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 SHMT1P34896 483 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 SLC4A3P48751 1232 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 FOXP4Q8IVH2 680 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 IGDCC4Q8TDY8 1250 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 BRF1Q92994 677 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 MCOLN1Q9GZU1 580 aa19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 SH2B2O14492 632 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-205ENST00000397406 SLURP2P0DP57 97 aa19.92■□□□□ 0.78
TSPAN4-205ENST00000397406 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
TSPAN4-205ENST00000397406 TMX3Q96JJ7 454 aa19.92■□□□□ 0.78
TSPAN4-205ENST00000397406 TPCN1Q9ULQ1 816 aa19.92■□□□□ 0.78
TSPAN4-205ENST00000397406 LARGE1O95461 756 aa19.91■□□□□ 0.78
TSPAN4-205ENST00000397406 FGD1P98174 961 aa19.91■□□□□ 0.78
TSPAN4-205ENST00000397406 TFAP4Q01664 338 aa19.91■□□□□ 0.78
TSPAN4-205ENST00000397406 ZNF444Q8N0Y2 327 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-205ENST00000397406 CRACR2BQ8N4Y2 399 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-205ENST00000397406 ZKSCAN3Q9BRR0 538 aa19.91■□□□□ 0.78
TSPAN4-205ENST00000397406 PLIN4Q96Q06 1357 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 TSPY2A6NKD2 308 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 IFIT3O14879 490 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 TBC1D8O95759 1140 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 EVCP57679 992 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 APOBRQ0VD83 1088 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 SEC23AQ15436 765 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 SUPT20HL1Q3ZLR7 823 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 TMEM67Q5HYA8 995 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 ZSCAN31Q96LW9 406 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 LY9Q9HBG7 655 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 TNKSO95271 1327 aa19.9■□□□□ 0.78
TSPAN4-205ENST00000397406 ATAD5Q96QE3 1844 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 FAM196BA6NMK8 535 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 LIFRP42702 1097 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 TATDN1Q6P1N9 297 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 IQCA1Q86XH1 822 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 REM2Q8IYK8 340 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 NEDD1Q8NHV4 660 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 WNK4Q96J92 1243 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 ZSCAN10Q96SZ4 725 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 UBAC1Q9BSL1 405 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 SENP2Q9HC62 589 aa19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 HERC5Q9UII4 1024 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-205ENST00000397406 PPP1R12BO60237 982 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 MAP3K10Q02779 954 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 CUL4AQ13619 759 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 ME3Q16798 604 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 SGMS1Q86VZ5 419 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 ENAHQ8N8S7 591 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 CNKSR2Q8WXI2 1034 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 SLC10A4Q96EP9 437 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 SH2B1Q9NRF2 756 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 IL17RBQ9NRM6 502 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 TCP11L1Q9NUJ3 509 aa19.88■□□□□ 0.77
TSPAN4-205ENST00000397406 TBC1D12O60347 775 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 NMT2O60551 498 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 TSPY3P0CV98 308 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 TSPY8P0CW00 308 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 AKR1B1P15121 316 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 DGKZQ13574 1117 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 WTAPQ15007 396 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 TRIM34Q9BYJ4 488 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 MYH4Q9Y623 1939 aa19.87■□□□□ 0.77
TSPAN4-205ENST00000397406 ERICH2A1L162 156 aa19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 IGF2BP3O00425 579 aaKnown RBP eCLIP19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 ST3GAL1Q11201 340 aa19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 ZNF274Q96GC6 653 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 CCDC17Q96LX7 622 aa19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 DAXXQ9UER7 740 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-205ENST00000397406 KLF18A0A0U1RQI7 1052 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 RCSD1Q6JBY9 416 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.85■□□□□ 0.771e-7■■■□□ 19.2
TSPAN4-205ENST00000397406 PTPN18Q99952 460 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.85■□□□□ 0.771e-7■■■■■ 39.7
TSPAN4-205ENST00000397406 OTOFQ9HC10 1997 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 IGKV6D-41A0A0C4DH26 115 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 UNCXA6NJT0 531 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 PDIA3P30101 505 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 IREB2P48200 963 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 NOVP48745 357 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 CERKLQ49MI3 558 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 CCDC178Q5BJE1 867 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms