RNA–Protein interactions for RNA: ENST00000393637.5

FGFR4-202, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FGFR4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-202ENST00000393637 NFIXQ14938 502 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 PTPN14Q15678 1187 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 GRIK5Q16478 980 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 CCAR2Q8N163 923 aaKnown RBP20.34■□□□□ 0.85
FGFR4-202ENST00000393637 DHX58Q96C10 678 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 TSPY2A6NKD2 308 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 PRPF3O43395 683 aaKnown RBP20.34■□□□□ 0.85
FGFR4-202ENST00000393637 TOM1O60784 492 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 XBP1P17861 261 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 SFPQP23246 707 aaKnown RBP eCLIP20.34■□□□□ 0.85
FGFR4-202ENST00000393637 FMR1Q06787 632 aaKnown RBP eCLIP20.34■□□□□ 0.85
FGFR4-202ENST00000393637 DIXDC1Q155Q3 683 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 ANKRD2Q9GZV1 360 aa20.34■□□□□ 0.85
FGFR4-202ENST00000393637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
FGFR4-202ENST00000393637 TRIM75PA6NK02 468 aa20.33■□□□□ 0.85
FGFR4-202ENST00000393637 AFMP43652 599 aa20.33■□□□□ 0.85
FGFR4-202ENST00000393637 DYNLL2Q96FJ2 89 aa20.33■□□□□ 0.85
FGFR4-202ENST00000393637 IMPACTQ9P2X3 320 aa20.33■□□□□ 0.85
FGFR4-202ENST00000393637 FGRP09769 529 aa20.33■□□□□ 0.84
FGFR4-202ENST00000393637 TMTC3Q6ZXV5 915 aa20.33■□□□□ 0.84
FGFR4-202ENST00000393637 SEMA3EO15041 775 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 E4F1Q66K89 784 aaPredicted RBP20.32■□□□□ 0.84
FGFR4-202ENST00000393637 CTCFLQ8NI51 663 aaPredicted RBP20.32■□□□□ 0.84
FGFR4-202ENST00000393637 RFC4P35249 363 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 NPY5RQ15761 445 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 CCDC112Q8NEF3 446 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 STAMQ92783 540 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 SMARCE1Q969G3 411 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 CEP131Q9UPN4 1083 aa20.32■□□□□ 0.84
FGFR4-202ENST00000393637 CNTNAP5Q8WYK1 1306 aa20.31■□□□□ 0.84
FGFR4-202ENST00000393637 ACTN4O43707 911 aaKnown RBP20.31■□□□□ 0.84
FGFR4-202ENST00000393637 RC3H1Q5TC82 1133 aaKnown RBP20.31■□□□□ 0.84
FGFR4-202ENST00000393637 NYAP1Q6ZVC0 841 aa20.31■□□□□ 0.84
FGFR4-202ENST00000393637 RBM28Q9NW13 759 aaKnown RBP20.31■□□□□ 0.84
FGFR4-202ENST00000393637 USP21Q9UK80 565 aa20.31■□□□□ 0.84
FGFR4-202ENST00000393637 BTAF1O14981 1849 aa20.31■□□□□ 0.84
FGFR4-202ENST00000393637 PPP2R5BQ15173 497 aa20.31■□□□□ 0.84
FGFR4-202ENST00000393637 SYMPKQ92797 1274 aaKnown RBP20.31■□□□□ 0.84
FGFR4-202ENST00000393637 MAP7D2Q96T17 732 aa20.31■□□□□ 0.84
FGFR4-202ENST00000393637 PIK3AP1Q6ZUJ8 805 aa20.3■□□□□ 0.84
FGFR4-202ENST00000393637 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
FGFR4-202ENST00000393637 ATP8A2Q9NTI2 1148 aa20.3■□□□□ 0.84
FGFR4-202ENST00000393637 HOOK1Q9UJC3 728 aaKnown RBP20.3■□□□□ 0.84
FGFR4-202ENST00000393637 NFE2L3Q9Y4A8 694 aa20.3■□□□□ 0.84
FGFR4-202ENST00000393637 VWA3AA6NCI4 1184 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 CTIFO43310 598 aaKnown RBP20.29■□□□□ 0.84
FGFR4-202ENST00000393637 USP5P45974 858 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 TFAP4Q01664 338 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 CCDC150Q8NCX0 1101 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 INTS13Q9NVM9 706 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 ORC4O43929 436 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 DDAH1O94760 285 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 RCSD1Q6JBY9 416 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 FAM196AQ6ZSG2 479 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 ZNF579Q8NAF0 562 aaKnown RBP20.29■□□□□ 0.84
FGFR4-202ENST00000393637 SLC44A5Q8NCS7 719 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 MED15Q96RN5 788 aa20.29■□□□□ 0.84
FGFR4-202ENST00000393637 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.29■□□□□ 0.84
FGFR4-202ENST00000393637 V9GYY5 206 aaPredicted RBP20.29■□□□□ 0.84
FGFR4-202ENST00000393637 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 CALM1P0DP23 149 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 CALM2P0DP24 149 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 CALM3P0DP25 149 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 NLRP5P59047 1200 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 PTGDRQ13258 359 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 KLHL10Q6JEL2 608 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 SMYD4Q8IYR2 804 aaPredicted RBP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 GPKOWQ92917 476 aaPredicted RBP eCLIP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 SAMSN1Q9NSI8 373 aaKnown RBP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 ARPP21Q9UBL0 812 aaPredicted RBP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 PAXBP1Q9Y5B6 917 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 COBLO75128 1261 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 STAG2Q8N3U4 1231 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 IL17RBQ9NRM6 502 aa20.28■□□□□ 0.84
FGFR4-202ENST00000393637 SAP30BPQ9UHR5 308 aaKnown RBP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
FGFR4-202ENST00000393637 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
FGFR4-202ENST00000393637 MCM7P33993 719 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 SARSP49591 514 aaKnown RBP20.27■□□□□ 0.84
FGFR4-202ENST00000393637 MORC3Q14149 939 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 TTC38Q5R3I4 469 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 TRAPPC3LQ5T215 181 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 PPP1R13BQ96KQ4 1090 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 STX17P56962 302 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 NCBP1Q09161 790 aaKnown RBP20.27■□□□□ 0.84
FGFR4-202ENST00000393637 RASGRP2Q7LDG7 609 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 RASGRP4Q8TDF6 673 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 TGFBRAP1Q8WUH2 860 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 TNFRSF25Q93038 417 aa20.27■□□□□ 0.84
FGFR4-202ENST00000393637 TOP1P11387 765 aaKnown RBP20.26■□□□□ 0.83
FGFR4-202ENST00000393637 PCP11498 1178 aaKnown RBP20.26■□□□□ 0.83
FGFR4-202ENST00000393637 SCG2P13521 617 aa20.26■□□□□ 0.83
FGFR4-202ENST00000393637 NT5DC1Q5TFE4 455 aa20.26■□□□□ 0.83
FGFR4-202ENST00000393637 VSTM4Q8IW00 320 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms