RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 BBOX1O75936 387 aa24.45■■□□□ 1.5
SPTBN4-203ENST00000392023 BAG3O95817 575 aa24.45■■□□□ 1.5
SPTBN4-203ENST00000392023 DHX40Q8IX18 779 aaKnown RBP24.45■■□□□ 1.5
SPTBN4-203ENST00000392023 FOXP1Q9H334 677 aaPredicted RBP24.45■■□□□ 1.5
SPTBN4-203ENST00000392023 ANO10Q9NW15 660 aa24.45■■□□□ 1.5
SPTBN4-203ENST00000392023 APBA3O96018 575 aa24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 RCAN1P53805 252 aa24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 MSL1Q68DK7 614 aa24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 AOPEPQ8N6M6 819 aa24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 RTFDC1Q9BY42 306 aaPredicted RBP24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 PCP11498 1178 aaKnown RBP24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 JMYQ8N9B5 988 aa24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 CTCFLQ8NI51 663 aaPredicted RBP24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 NOL10Q9BSC4 688 aaKnown RBP24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 KCNF1Q9H3M0 494 aa24.44■■□□□ 1.5
SPTBN4-203ENST00000392023 ADAMTS3O15072 1205 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 GTF2IP78347 998 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 TMTC3Q6ZXV5 915 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 WNT7AO00755 349 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 PRPF3O43395 683 aaKnown RBP24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 PTGS1P23219 599 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 ZNF75DP51815 510 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 GSTO1P78417 241 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 PNOCQ13519 176 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 LONRF3Q496Y0 759 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 RGS22Q8NE09 1264 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 MXD3Q9BW11 206 aa24.43■■□□□ 1.5
SPTBN4-203ENST00000392023 IL1R1P14778 569 aa24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 FOXN1O15353 648 aa24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 HOXA10P31260 410 aaPredicted RBP24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 ZRSR1Q15695 479 aaKnown RBP24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 RESP18Q5W5W9 173 aa24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 RASGRP2Q7LDG7 609 aa24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 STAG2Q8N3U4 1231 aa24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 HPSEQ9Y251 543 aa24.42■■□□□ 1.5
SPTBN4-203ENST00000392023 KIAA1551Q9HCM1 1747 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 PPEF1O14829 653 aaPredicted RBP24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 C15orf52Q6ZUT6 534 aaKnown RBP24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 KRI1Q8N9T8 703 aaKnown RBP24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 IPO4Q8TEX9 1081 aaKnown RBP24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 PHF20Q9BVI0 1012 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 RBM28Q9NW13 759 aaKnown RBP24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 TMEM51Q9NW97 253 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 DDAH1O94760 285 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 PPP2R5BQ15173 497 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 RILPL1Q5EBL4 403 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 USP49Q70CQ1 688 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 CCDC186Q7Z3E2 898 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 PLA2G4DQ86XP0 818 aa24.41■■□□□ 1.5
SPTBN4-203ENST00000392023 TSPY3P0CV98 308 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 TSPY8P0CW00 308 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 CALM1P0DP23 149 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 CALM2P0DP24 149 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 CALM3P0DP25 149 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 KIAA2012Q0VF49 1180 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 TEX11Q8IYF3 940 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 CEP57L1Q8IYX8 460 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 PDILTQ8N807 584 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 CNTNAP5Q8WYK1 1306 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 KAT14Q9H8E8 782 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 KCNH3Q9ULD8 1083 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 STX8Q9UNK0 236 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 CUTAO60888 179 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 LDHCP07864 332 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 PPP4CP60510 307 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 DOK7Q18PE1 504 aa24.4■■□□□ 1.5
SPTBN4-203ENST00000392023 XBP1P17861 261 aa24.39■■□□□ 1.5
SPTBN4-203ENST00000392023 ZNF444Q8N0Y2 327 aaPredicted RBP24.39■■□□□ 1.5
SPTBN4-203ENST00000392023 CRAMP1Q96RY5 1269 aa24.39■■□□□ 1.5
SPTBN4-203ENST00000392023 PYCARDQ9ULZ3 195 aa24.39■■□□□ 1.5
SPTBN4-203ENST00000392023 LAMB1P07942 1786 aa24.39■■□□□ 1.49
SPTBN4-203ENST00000392023 MAST2Q6P0Q8 1798 aa24.39■■□□□ 1.49
SPTBN4-203ENST00000392023 KRT2P35908 639 aa24.39■■□□□ 1.49
SPTBN4-203ENST00000392023 PNMA1Q8ND90 353 aa24.39■■□□□ 1.49
SPTBN4-203ENST00000392023 FBXO2Q9UK22 296 aaPredicted RBP24.39■■□□□ 1.49
SPTBN4-203ENST00000392023 LRMPQ12912 555 aa24.38■■□□□ 1.49
SPTBN4-203ENST00000392023 CAVIN2O95810 425 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 NPY5RQ15761 445 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 FOXP4Q8IVH2 680 aaPredicted RBP24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 GPKOWQ92917 476 aaPredicted RBP eCLIP24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 CPVLQ9H3G5 476 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 CLIP2Q9UDT6 1046 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 MMP10P09238 476 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 GOLGA8HP0CJ92 632 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 PICALMQ13492 652 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 ZNF174Q15697 407 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 METTL16Q86W50 562 aaKnown RBP24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 AMOTL1Q8IY63 956 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 CNNM3Q8NE01 707 aa24.37■■□□□ 1.49
SPTBN4-203ENST00000392023 GPR75-ASB3A0A0A6YYF3 556 aa24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 KLRG2A4D1S0 409 aaPredicted RBP24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 POLR2DO15514 142 aaKnown RBP24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 SRGNP10124 158 aa24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 GRAMD1CQ8IYS0 662 aa24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 ZNF219Q9P2Y4 722 aaPredicted RBP24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 PTPREP23469 700 aa24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 CCDC144BQ3MJ40 725 aa24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
SPTBN4-203ENST00000392023 CSRNP2Q9H175 543 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms