RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 KIAA0754O94854 1291 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 MYZAPP0CAP1 466 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 SKILP12757 684 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 HERC4Q5GLZ8 1057 aaPredicted RBP11.52□□□□□ -0.57
PKP4-201ENST00000389757 ZMYM1Q5SVZ6 1142 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 NCAPG2Q86XI2 1143 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
PKP4-201ENST00000389757 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 CETN3O15182 167 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 TACC1O75410 805 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 RAPGEF1Q13905 1077 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 COL15A1P39059 1388 aa11.52□□□□□ -0.57
PKP4-201ENST00000389757 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 TRPC3Q13507 836 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 HLFQ16534 295 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 CABP7Q86V35 215 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 SPECC1Q5M775 1068 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 CCDC186Q7Z3E2 898 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 MIER3Q7Z3K6 550 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 DHX37Q8IY37 1157 aaKnown RBP11.51□□□□□ -0.57
PKP4-201ENST00000389757 BLIDQ8IZY5 108 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 UIMC1Q96RL1 719 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 CTNND2Q9UQB3 1225 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 LUC7L2Q9Y383 392 aaKnown RBP11.51□□□□□ -0.57
PKP4-201ENST00000389757 H7C1W4 665 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 C21orf2O43822 256 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 USP14P54578 494 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 SLC8A3P57103 927 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 KIF5AQ12840 1032 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 OTUD6AQ7L8S5 288 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 GOLGA6L7A0A1B0GV03 622 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 GJC1P36383 396 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 CCNA1P78396 465 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 PTPN12Q05209 780 aaKnown RBP11.51□□□□□ -0.57
PKP4-201ENST00000389757 ARHGEF6Q15052 776 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 FAM173BQ6P4H8 233 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 MYCT1Q8N699 235 aa11.51□□□□□ -0.57
PKP4-201ENST00000389757 DHX36Q9H2U1 1008 aaKnown RBP11.51□□□□□ -0.57
PKP4-201ENST00000389757 NOC4LQ9BVI4 516 aaKnown RBP11.5□□□□□ -0.57
PKP4-201ENST00000389757 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 USP31Q70CQ4 1352 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 TXNRD1Q16881 649 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 SERPINB13Q9UIV8 391 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 ZMYM6O95789 1325 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 CKAP4Q07065 602 aaKnown RBP11.5□□□□□ -0.57
PKP4-201ENST00000389757 KRT86O43790 486 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 CCDC175P0C221 793 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 SCG2P13521 617 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 DYNLL1P63167 89 aaKnown RBP11.5□□□□□ -0.57
PKP4-201ENST00000389757 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
PKP4-201ENST00000389757 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 TPH2Q8IWU9 490 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
PKP4-201ENST00000389757 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 HSPA1LP34931 641 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 ADD2P35612 726 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 KCTD2Q14681 263 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 ME3Q16798 604 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 PDCL2Q8N4E4 241 aa11.5□□□□□ -0.57
PKP4-201ENST00000389757 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
PKP4-201ENST00000389757 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 KRT5P13647 590 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 KIFAP3Q92845 792 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 PABPN1LA6NDY0 278 aaKnown RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 STX10O60499 249 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 VPS72Q15906 364 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 FAM47CQ5HY64 1035 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 DYMQ7RTS9 669 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 KDM3AQ9Y4C1 1321 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 CARMIL3Q8ND23 1372 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 CNGA1P29973 690 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 SMC1AQ14683 1233 aaKnown RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 PRR16Q569H4 304 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 LEO1Q8WVC0 666 aaPredicted RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 DDX12PQ92771 950 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 PFKFB2O60825 505 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 TTLL1O95922 423 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 OSBPP22059 807 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 CCDC117Q8IWD4 279 aaPredicted RBP11.49□□□□□ -0.57
PKP4-201ENST00000389757 HACE1Q8IYU2 909 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 PTCH1Q13635 1447 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 LMTK2Q8IWU2 1503 aa11.49□□□□□ -0.57
PKP4-201ENST00000389757 FSD2A1L4K1 749 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms