RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 CXCL9Q07325 125 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 CAVIN1Q6NZI2 390 aaKnown RBP23.57■■□□□ 1.36
CPNE9-202ENST00000383831 RNF26Q9BY78 433 aaPredicted RBP23.57■■□□□ 1.36
CPNE9-202ENST00000383831 EHD4Q9H223 541 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 TAOK2Q9UL54 1235 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 PLIN4Q96Q06 1357 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 DEXIO95424 95 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 KIF23Q02241 960 aaPredicted RBP23.57■■□□□ 1.36
CPNE9-202ENST00000383831 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 SCAND2PQ9GZW5 306 aaPredicted RBP23.57■■□□□ 1.36
CPNE9-202ENST00000383831 DHX36Q9H2U1 1008 aaKnown RBP23.57■■□□□ 1.36
CPNE9-202ENST00000383831 HDAC9Q9UKV0 1011 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 STX8Q9UNK0 236 aa23.57■■□□□ 1.36
CPNE9-202ENST00000383831 MYH6P13533 1939 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 DDTLA6NHG4 134 aaPredicted RBP23.56■■□□□ 1.36
CPNE9-202ENST00000383831 KIF28PB7ZC32 967 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 SHMT1P34896 483 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 UBE2HP62256 183 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 SH3BP5LQ7L8J4 393 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 AGBL3Q8NEM8 1001 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 JDP2Q8WYK2 163 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.56■■□□□ 1.36
CPNE9-202ENST00000383831 ELP1O95163 1332 aa23.56■■□□□ 1.36
CPNE9-202ENST00000383831 SPDYE2BA6NHP3 402 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 SPDYE6P0CI01 402 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 AKR1B1P15121 316 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 TRIM29Q14134 588 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 LEO1Q8WVC0 666 aaPredicted RBP23.55■■□□□ 1.36
CPNE9-202ENST00000383831 CEP95Q96GE4 821 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 RBM27Q9P2N5 1060 aaKnown RBP23.55■■□□□ 1.36
CPNE9-202ENST00000383831 CNTNAP5Q8WYK1 1306 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 LTBP3Q9NS15 1303 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 OGFOD1Q8N543 542 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 SRBD1Q8N5C6 995 aaKnown RBP23.55■■□□□ 1.36
CPNE9-202ENST00000383831 SPATA32Q96LK8 384 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 MAP3K14Q99558 947 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 ARFGEF1Q9Y6D6 1849 aa23.55■■□□□ 1.36
CPNE9-202ENST00000383831 PRPF3O43395 683 aaKnown RBP23.54■■□□□ 1.36
CPNE9-202ENST00000383831 SLURP2P0DP57 97 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 DEKP35659 375 aaKnown RBP23.54■■□□□ 1.36
CPNE9-202ENST00000383831 NOVP48745 357 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 RASSF7Q02833 373 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 GRM4Q14833 912 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 DLGAP5Q15398 846 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 CIAPIN1Q6FI81 312 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 BRAPQ7Z569 592 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 DNAJC18Q9H819 358 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 CFAP45Q9UL16 551 aa23.54■■□□□ 1.36
CPNE9-202ENST00000383831 ENTPD3O75355 529 aa23.53■■□□□ 1.36
CPNE9-202ENST00000383831 KIF5BP33176 963 aa23.53■■□□□ 1.36
CPNE9-202ENST00000383831 AKAP17AQ02040 695 aaKnown RBP23.53■■□□□ 1.36
CPNE9-202ENST00000383831 PKN1Q16512 942 aa23.53■■□□□ 1.36
CPNE9-202ENST00000383831 ZSCAN29Q8IWY8 852 aaPredicted RBP23.53■■□□□ 1.36
CPNE9-202ENST00000383831 ZNF396Q96N95 335 aaPredicted RBP23.53■■□□□ 1.36
CPNE9-202ENST00000383831 FTOQ9C0B1 505 aaKnown RBP eCLIP23.53■■□□□ 1.36
CPNE9-202ENST00000383831 PI4KBQ9UBF8 816 aa23.53■■□□□ 1.36
CPNE9-202ENST00000383831 V9GY48 417 aaPredicted RBP23.53■■□□□ 1.36
CPNE9-202ENST00000383831 IGKV6D-41A0A0C4DH26 115 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 TPRNQ4KMQ1 711 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 ATL3Q6DD88 541 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 TMEM63CQ9P1W3 806 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 hCG_1642624A0A1W2PR95 340 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 TOP1P11387 765 aaKnown RBP23.52■■□□□ 1.36
CPNE9-202ENST00000383831 USP28Q96RU2 1077 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 MTMR4Q9NYA4 1195 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 MAD2L2Q9UI95 211 aa23.52■■□□□ 1.36
CPNE9-202ENST00000383831 COL2A1P02458 1487 aaPredicted RBP23.51■■□□□ 1.35
CPNE9-202ENST00000383831 ATRNL1Q5VV63 1379 aa23.51■■□□□ 1.35
CPNE9-202ENST00000383831 GREB1LQ9C091 1923 aaPredicted RBP23.51■■□□□ 1.35
CPNE9-202ENST00000383831 PRELPP51888 382 aa23.51■■□□□ 1.35
CPNE9-202ENST00000383831 CEBPZQ03701 1054 aaKnown RBP23.51■■□□□ 1.35
CPNE9-202ENST00000383831 STAG2Q8N3U4 1231 aa23.51■■□□□ 1.35
CPNE9-202ENST00000383831 TMOD2Q9NZR1 351 aa23.51■■□□□ 1.35
CPNE9-202ENST00000383831 ZNF70Q9UC06 446 aaPredicted RBP23.51■■□□□ 1.35
CPNE9-202ENST00000383831 CLRN2A0PK11 232 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 FAM196BA6NMK8 535 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 MMP1P03956 469 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 MYSM1Q5VVJ2 828 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 MTMR14Q8NCE2 650 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 KCNJ14Q9UNX9 436 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 MTMR7Q9Y216 660 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 TNIP1Q15025 636 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 ZSCAN23Q3MJ62 389 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 SHISA4Q96DD7 197 aa23.5■■□□□ 1.35
CPNE9-202ENST00000383831 TCP10L2B9ZVM9 353 aa23.49■■□□□ 1.35
CPNE9-202ENST00000383831 U2AF2P26368 475 aaKnown RBP eCLIP23.49■■□□□ 1.35
CPNE9-202ENST00000383831 SPDYE2Q495Y8 402 aa23.49■■□□□ 1.35
CPNE9-202ENST00000383831 RASGRP2Q7LDG7 609 aa23.49■■□□□ 1.35
CPNE9-202ENST00000383831 CLEC10AQ8IUN9 316 aa23.49■■□□□ 1.35
CPNE9-202ENST00000383831 FOXP4Q8IVH2 680 aaPredicted RBP23.49■■□□□ 1.35
CPNE9-202ENST00000383831 RCOR1Q9UKL0 485 aa23.49■■□□□ 1.35
CPNE9-202ENST00000383831 GNAQP50148 359 aa23.48■■□□□ 1.35
CPNE9-202ENST00000383831 GNL2Q13823 731 aaKnown RBP23.48■■□□□ 1.35
CPNE9-202ENST00000383831 PALM3A6NDB9 673 aaPredicted RBP23.47■■□□□ 1.35
CPNE9-202ENST00000383831 METTL16Q86W50 562 aaKnown RBP23.47■■□□□ 1.35
CPNE9-202ENST00000383831 ZBED3Q96IU2 234 aaPredicted RBP23.47■■□□□ 1.35
CPNE9-202ENST00000383831 CCDC17Q96LX7 622 aa23.47■■□□□ 1.35
CPNE9-202ENST00000383831 TRIM34Q9BYJ4 488 aa23.47■■□□□ 1.35
CPNE9-202ENST00000383831 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms