RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 KIAA1468Q9P260 1216 aa19.78■□□□□ 0.76
PDX1-201ENST00000381033 USP17L3A6NCW0 530 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 USP17L4A6NCW7 530 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 RASGRP2Q7LDG7 609 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 MTA3Q9BTC8 594 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 C6orf229H3BNL8 230 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 FOXN1O15353 648 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 PTGS1P23219 599 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 TFAP4Q01664 338 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 GGA1Q9UJY5 639 aa19.77■□□□□ 0.76
PDX1-201ENST00000381033 SYKP43405 635 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 C12orf60Q5U649 245 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 SPTY2D1Q68D10 685 aaPredicted RBP19.76■□□□□ 0.75
PDX1-201ENST00000381033 AOPEPQ8N6M6 819 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 TBC1D16Q8TBP0 767 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 WASF1Q92558 559 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 ARPP21Q9UBL0 812 aaPredicted RBP19.76■□□□□ 0.75
PDX1-201ENST00000381033 ORC4O43929 436 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 SAFBQ15424 915 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDX1-201ENST00000381033 SLC27A3Q5K4L6 730 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 USP49Q70CQ1 688 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 RBM17Q96I25 401 aaKnown RBP19.76■□□□□ 0.75
PDX1-201ENST00000381033 ARID3AQ99856 593 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 RNF26Q9BY78 433 aaPredicted RBP19.76■□□□□ 0.75
PDX1-201ENST00000381033 PYCARDQ9ULZ3 195 aa19.76■□□□□ 0.75
PDX1-201ENST00000381033 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 PPP6R2O75170 966 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 SLC3A2P08195 630 aaKnown RBP19.75■□□□□ 0.75
PDX1-201ENST00000381033 ZNF75DP51815 510 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 PNOCQ13519 176 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 LONRF3Q496Y0 759 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 TAF3Q5VWG9 929 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 RTFDC1Q9BY42 306 aaPredicted RBP19.75■□□□□ 0.75
PDX1-201ENST00000381033 HPSEQ9Y251 543 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 OFD1O75665 1012 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 AKAP17AQ02040 695 aaKnown RBP19.75■□□□□ 0.75
PDX1-201ENST00000381033 LRMPQ12912 555 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 SBK1Q52WX2 424 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 MFSD14BQ5SR56 506 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 PLA2G4DQ86XP0 818 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 DRC7Q8IY82 874 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 MXD3Q9BW11 206 aa19.75■□□□□ 0.75
PDX1-201ENST00000381033 BTDP43251 543 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 PDE4BQ07343 736 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 CCDC186Q7Z3E2 898 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 STAG2Q8N3U4 1231 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 FOXP1Q9H334 677 aaPredicted RBP19.74■□□□□ 0.75
PDX1-201ENST00000381033 GOLGA6L19H0YKK7 550 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 TMTC3Q6ZXV5 915 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 COL23A1Q86Y22 540 aaPredicted RBP19.74■□□□□ 0.75
PDX1-201ENST00000381033 FOXP4Q8IVH2 680 aaPredicted RBP19.74■□□□□ 0.75
PDX1-201ENST00000381033 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.74■□□□□ 0.75
PDX1-201ENST00000381033 ANO10Q9NW15 660 aa19.74■□□□□ 0.75
PDX1-201ENST00000381033 BECN2A8MW95 431 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 F8W031 263 aaPredicted RBP19.73■□□□□ 0.75
PDX1-201ENST00000381033 NPY5RQ15761 445 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 CCDC144BQ3MJ40 725 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 RESP18Q5W5W9 173 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 RCAN1P53805 252 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 PDILTQ8N807 584 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 R3HCC1Q9Y3T6 440 aaKnown RBP19.73■□□□□ 0.75
PDX1-201ENST00000381033 CNTNAP5Q8WYK1 1306 aa19.73■□□□□ 0.75
PDX1-201ENST00000381033 PRPF3O43395 683 aaKnown RBP19.72■□□□□ 0.75
PDX1-201ENST00000381033 ARID5BQ14865 1188 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 PHF20Q9BVI0 1012 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 CPVLQ9H3G5 476 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 MKNK2Q9HBH9 465 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 ATP2B4P23634 1241 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 GTF2IP78347 998 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 KIAA2012Q0VF49 1180 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 METTL16Q86W50 562 aaKnown RBP19.72■□□□□ 0.75
PDX1-201ENST00000381033 FBXO2Q9UK22 296 aaPredicted RBP19.72■□□□□ 0.75
PDX1-201ENST00000381033 KCNH3Q9ULD8 1083 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 LAMB1P07942 1786 aa19.72■□□□□ 0.75
PDX1-201ENST00000381033 IL1R1P14778 569 aa19.71■□□□□ 0.75
PDX1-201ENST00000381033 GRAMD1CQ8IYS0 662 aa19.71■□□□□ 0.75
PDX1-201ENST00000381033 KRI1Q8N9T8 703 aaKnown RBP19.71■□□□□ 0.75
PDX1-201ENST00000381033 CTCFLQ8NI51 663 aaPredicted RBP19.71■□□□□ 0.75
PDX1-201ENST00000381033 BBOX1O75936 387 aa19.71■□□□□ 0.75
PDX1-201ENST00000381033 PCP11498 1178 aaKnown RBP19.71■□□□□ 0.75
PDX1-201ENST00000381033 JMYQ8N9B5 988 aa19.71■□□□□ 0.75
PDX1-201ENST00000381033 MAST2Q6P0Q8 1798 aa19.71■□□□□ 0.75
PDX1-201ENST00000381033 BAG3O95817 575 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 HOXA10P31260 410 aaPredicted RBP19.7■□□□□ 0.74
PDX1-201ENST00000381033 SLC35G1Q2M3R5 365 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 RILPL1Q5EBL4 403 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 CEP57L1Q8IYX8 460 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 GPKOWQ92917 476 aaPredicted RBP eCLIP19.7■□□□□ 0.74
PDX1-201ENST00000381033 STX8Q9UNK0 236 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 CUTAO60888 179 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 DDAH1O94760 285 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 APBA3O96018 575 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 C15orf52Q6ZUT6 534 aaKnown RBP19.7■□□□□ 0.74
PDX1-201ENST00000381033 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
PDX1-201ENST00000381033 GOLGA8HP0CJ92 632 aa19.69■□□□□ 0.74
PDX1-201ENST00000381033 SLURP2P0DP57 97 aa19.69■□□□□ 0.74
PDX1-201ENST00000381033 ZSCAN20P17040 1043 aaPredicted RBP19.69■□□□□ 0.74
PDX1-201ENST00000381033 PPP4CP60510 307 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms