RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 KRBA2Q6ZNG9 492 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 RNF26Q9BY78 433 aaPredicted RBP14.2□□□□□ -0.14
CDX2-201ENST00000381020 ZSWIM4Q9H7M6 989 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 DNAI1Q9UI46 699 aa14.2□□□□□ -0.14
CDX2-201ENST00000381020 MED1Q15648 1581 aaPredicted RBP14.19□□□□□ -0.14
CDX2-201ENST00000381020 ERCC3P19447 782 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 ALX1Q15699 326 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 LONRF3Q496Y0 759 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 PDCL2Q8N4E4 241 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 TBC1D22AQ8WUA7 517 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 H0YIN7 160 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 ZSCAN12O43309 604 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 GNG11P61952 73 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 CTR9Q6PD62 1173 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 BARGINQ6ZT62 677 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 FANCLQ9NW38 375 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
CDX2-201ENST00000381020 BIN2Q9UBW5 565 aaPredicted RBP14.19□□□□□ -0.14
CDX2-201ENST00000381020 HPS5Q9UPZ3 1129 aa14.19□□□□□ -0.14
CDX2-201ENST00000381020 TXNRD3Q86VQ6 643 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 EXOC1Q9NV70 894 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 ZYXQ15942 572 aaKnown RBP14.18□□□□□ -0.14
CDX2-201ENST00000381020 USP17L2Q6R6M4 530 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 BLIDQ8IZY5 108 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 UBXN4Q92575 508 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 VPS16Q9H269 839 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 ABCC12Q96J65 1359 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
CDX2-201ENST00000381020 NSUN4Q96CB9 384 aaKnown RBP14.18□□□□□ -0.14
CDX2-201ENST00000381020 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 MAP7D2Q96T17 732 aa14.18□□□□□ -0.14
CDX2-201ENST00000381020 SMCO2A6NFE2 343 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 TDRD7Q8NHU6 1098 aaKnown RBP14.17□□□□□ -0.14
CDX2-201ENST00000381020 CAGE1Q8TC20 777 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
CDX2-201ENST00000381020 EPSTI1Q96J88 318 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
CDX2-201ENST00000381020 CD209Q9NNX6 404 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 BBOX1O75936 387 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 MMP10P09238 476 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 FGFR2P21802 821 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 HSPA1LP34931 641 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
CDX2-201ENST00000381020 NLGN1Q8N2Q7 840 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 PDLIM2Q96JY6 352 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 ARGLU1Q9NWB6 273 aaPredicted RBP14.17□□□□□ -0.14
CDX2-201ENST00000381020 CTNND2Q9UQB3 1225 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 CACNB3P54284 484 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 AMPD3Q01432 767 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 ARID5BQ14865 1188 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 SGMS1Q86VZ5 419 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 ZNF512BQ96KM6 892 aaPredicted RBP14.17□□□□□ -0.14
CDX2-201ENST00000381020 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
CDX2-201ENST00000381020 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 ZNF500O60304 480 aaPredicted RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 CACTINQ8WUQ7 758 aaKnown RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 KIF1AQ12756 1690 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 JCADQ9P266 1359 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 PSMA7O14818 248 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 WDHD1O75717 1129 aaPredicted RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 CASP1P29466 404 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 KIF4BQ2VIQ3 1234 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 SYT10Q6XYQ8 523 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 KIAA1328Q86T90 577 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 PYM1Q9BRP8 204 aaKnown RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 RMND1Q9NWS8 449 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 DDAH1O94760 285 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 KARSQ15046 597 aaKnown RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 MTERF4Q7Z6M4 381 aaKnown RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 ADGRA1Q86SQ6 560 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 FMR1NBQ8N0W7 255 aaPredicted RBP14.16□□□□□ -0.14
CDX2-201ENST00000381020 CUL5Q93034 780 aa14.16□□□□□ -0.14
CDX2-201ENST00000381020 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 PPP6R2O75170 966 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 SLC1A4P43007 532 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 C2CD5Q86YS7 1000 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 GPIHBP1Q8IV16 184 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 MLKLQ8NB16 471 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 GPSM2P81274 684 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 GOLGA8FQ08AF8 430 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 GOLGA8DPQ0D2H9 430 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 NONOQ15233 471 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDX2-201ENST00000381020 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 KIF2AO00139 706 aaPredicted RBP14.15□□□□□ -0.14
CDX2-201ENST00000381020 PRR5LQ6MZQ0 368 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 ZBTB9Q96C00 473 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 RGPD2P0DJD1 1756 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 DYNC1I1O14576 645 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 TRIM21P19474 475 aaKnown RBP14.15□□□□□ -0.14
CDX2-201ENST00000381020 TEX35Q5T0J7 233 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 FKBP15Q5T1M5 1219 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 KRT79Q5XKE5 535 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms