RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 NEK11Q8NG66 645 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 RTEL1Q9NZ71 1219 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 NRXN1Q9ULB1 1477 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 ADCY7P51828 1080 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 PTPN21Q16825 1174 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 STRBPQ96SI9 672 aaKnown RBP14.84□□□□□ -0.03
NPHP4-203ENST00000378169 GOPCQ9HD26 462 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 FANCLQ9NW38 375 aa14.84□□□□□ -0.03
NPHP4-203ENST00000378169 ADKP55263 362 aaKnown RBP14.83□□□□□ -0.04
NPHP4-203ENST00000378169 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-203ENST00000378169 SLC39A14Q15043 492 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 PTPRUQ92729 1446 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 IQSEC2Q5JU85 1478 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 RHOXF2BP0C7M4 288 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-203ENST00000378169 DPCR1Q3MIW9 517 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 TEKT1Q969V4 418 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 TTC14Q96N46 770 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 RHOXF2Q9BQY4 288 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 STK32BQ9NY57 414 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 C1orf167Q5SNV9 1468 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 HERC4Q5GLZ8 1057 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-203ENST00000378169 CCDC122Q5T0U0 273 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 FNBP4Q8N3X1 1017 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-203ENST00000378169 QTRT2Q9H974 415 aaKnown RBP14.83□□□□□ -0.04
NPHP4-203ENST00000378169 RCOR1Q9UKL0 485 aa14.83□□□□□ -0.04
NPHP4-203ENST00000378169 CFBP00751 764 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 USP17L8P0C7I0 530 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 CDC25AP30304 524 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 KRT83P78385 493 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 KRBA2Q6ZNG9 492 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 LINC00301Q8NCQ3 95 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 TRERF1Q96PN7 1200 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 ATP8A2Q9NTI2 1148 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
NPHP4-203ENST00000378169 TACC1O75410 805 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 SERPINB2P05120 415 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 GTF2F1P35269 517 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■■■■■ 27.9
NPHP4-203ENST00000378169 FOXO4P98177 505 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 RESTQ13127 1097 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 CALCRLQ16602 461 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 CABP7Q86V35 215 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 ISCA1Q9BUE6 129 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 TNS3Q68CZ2 1445 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 ATP10DQ9P241 1426 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 PPIP5K2O43314 1243 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 KRT13P13646 458 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 ATP2B4P23634 1241 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 CCDC65Q8IXS2 484 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 TCHPQ9BT92 498 aa14.82□□□□□ -0.04
NPHP4-203ENST00000378169 SH2B2O14492 632 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-203ENST00000378169 COBLO75128 1261 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 RAPGEF1Q13905 1077 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 MAEAQ7L5Y9 396 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 SOS2Q07890 1332 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-203ENST00000378169 NCAPH2Q6IBW4 605 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 C11orf57Q6ZUT1 292 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-203ENST00000378169 NELFCDQ8IXH7 590 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 DYNLL2Q96FJ2 89 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 PRDX5P30044 214 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 TECP42680 631 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 CERS3Q8IU89 383 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 GSTTP1A0A1W2PQM5 241 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 CETN2P41208 172 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 IFFO1Q0D2I5 559 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 NELFBQ8WX92 580 aa14.81□□□□□ -0.04
NPHP4-203ENST00000378169 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
NPHP4-203ENST00000378169 NAA15Q9BXJ9 866 aaKnown RBP14.81□□□□□ -0.04
NPHP4-203ENST00000378169 XDHP47989 1333 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 MCM3P25205 808 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 TBC1D10CQ8IV04 446 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 GRAMD1CQ8IYS0 662 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 HOMER2Q9NSB8 354 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 CNNM4Q6P4Q7 775 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 ATG9AQ7Z3C6 839 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 DHX37Q8IY37 1157 aaKnown RBP14.8□□□□□ -0.04
NPHP4-203ENST00000378169 KRT222Q8N1A0 295 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 SRRTQ9BXP5 876 aaKnown RBP14.8□□□□□ -0.04
NPHP4-203ENST00000378169 POLR3EQ9NVU0 708 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 DDX39AO00148 427 aaKnown RBP14.8□□□□□ -0.04
NPHP4-203ENST00000378169 PRKG1Q13976 671 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 SYMPKQ92797 1274 aaKnown RBP14.8□□□□□ -0.04
NPHP4-203ENST00000378169 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.8□□□□□ -0.04
NPHP4-203ENST00000378169 CSRNP2Q9H175 543 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 PYCARDQ9ULZ3 195 aa14.8□□□□□ -0.04
NPHP4-203ENST00000378169 A0A1W2PQ27 194 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 A0A1W2PQ64 194 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 A0A1W2PQD8 194 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 PHACTR2O75167 634 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 KIAA0754O94854 1291 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 IFNAR1P17181 557 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 PAF1Q8N7H5 531 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 LZTS2Q9BRK4 669 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 CARD6Q9BX69 1037 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 ZHX1Q9UKY1 873 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms