RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 REREQ9P2R6 1566 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 ZNF804BA4D1E1 1349 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 GSDMDP57764 484 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 TTC38Q5R3I4 469 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 SPTY2D1Q68D10 685 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 INTS5Q6P9B9 1019 aaKnown RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 SHC4Q6S5L8 630 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 CCDC12Q8WUD4 166 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 FAM84BQ96KN1 310 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 SLC16A2P36021 539 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 TRIM47Q96LD4 638 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 ZC3H12CQ9C0D7 883 aaKnown RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 PKD2L1Q9P0L9 805 aa11.43□□□□□ -0.58
ZNF550-203ENST00000376230 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
ZNF550-203ENST00000376230 MROH7-TTC4A0A0A0MT08 1334 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 CAMTA2O94983 1202 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 YEATS4O95619 227 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 NLRP12P59046 1061 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 PTPROQ16827 1216 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 FMR1NBQ8N0W7 255 aaPredicted RBP11.42□□□□□ -0.58
ZNF550-203ENST00000376230 ENAHQ8N8S7 591 aaPredicted RBP11.42□□□□□ -0.58
ZNF550-203ENST00000376230 PPP1R13BQ96KQ4 1090 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 PSMB7Q99436 277 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 PHACTR2O75167 634 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 IPO7O95373 1038 aaKnown RBP11.42□□□□□ -0.58
ZNF550-203ENST00000376230 MCM6Q14566 821 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 PNMA1Q8ND90 353 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 MRFAP1L1Q96HT8 127 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 ANKRD26Q9UPS8 1709 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 CBFA2T2O43439 604 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 GNAT2P19087 354 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 ASIC1P78348 528 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 DHX40Q8IX18 779 aaKnown RBP11.42□□□□□ -0.58
ZNF550-203ENST00000376230 IGDCC4Q8TDY8 1250 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 SH3RF3Q8TEJ3 882 aaPredicted RBP11.42□□□□□ -0.58
ZNF550-203ENST00000376230 MON2Q7Z3U7 1717 aa11.42□□□□□ -0.58
ZNF550-203ENST00000376230 CMA1P23946 247 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 CLCN6P51797 869 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 GABPB1Q06547 395 aaPredicted RBP11.41□□□□□ -0.58
ZNF550-203ENST00000376230 KRBA2Q6ZNG9 492 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 TMTC2Q8N394 836 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.58
ZNF550-203ENST00000376230 CCNT1O60563 726 aaKnown RBP11.41□□□□□ -0.58
ZNF550-203ENST00000376230 SLFN14P0C7P3 912 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 LMAN1P49257 510 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 CCZ1BP86790 482 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
ZNF550-203ENST00000376230 RILPL1Q5EBL4 403 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 ZNF34Q8IZ26 560 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 FNBP4Q8N3X1 1017 aaPredicted RBP11.41□□□□□ -0.58
ZNF550-203ENST00000376230 GJA10Q969M2 543 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 GDAP1L1Q96MZ0 367 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 DBNDD1Q9H9R9 158 aa11.41□□□□□ -0.58
ZNF550-203ENST00000376230 KIF5BP33176 963 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 MTIF2P46199 727 aaKnown RBP11.4□□□□□ -0.58
ZNF550-203ENST00000376230 EVCP57679 992 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 CAVIN2O95810 425 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
ZNF550-203ENST00000376230 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.58
ZNF550-203ENST00000376230 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.58
ZNF550-203ENST00000376230 COA7Q96BR5 231 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 CAPZA3Q96KX2 299 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
ZNF550-203ENST00000376230 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.4□□□□□ -0.58
ZNF550-203ENST00000376230 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.59
ZNF550-203ENST00000376230 FOXP2O15409 715 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 CUTAO60888 179 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 CASQ1P31415 396 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 BTDP43251 543 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
ZNF550-203ENST00000376230 USH1GQ495M9 461 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 E4F1Q66K89 784 aaPredicted RBP11.39□□□□□ -0.59
ZNF550-203ENST00000376230 CCDC47Q96A33 483 aaKnown RBP11.39□□□□□ -0.59
ZNF550-203ENST00000376230 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
ZNF550-203ENST00000376230 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
ZNF550-203ENST00000376230 ERVV-1B6SEH8 477 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 MMP1P03956 469 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 TECP42680 631 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
ZNF550-203ENST00000376230 ARMCX5Q6P1M9 558 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 SPICE1Q8N0Z3 855 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 HPS3Q969F9 1004 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 DACH1Q9UI36 760 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 GUCA1BQ9UMX6 200 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 OVOS2A0A0G2JMS6 1433 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 NWD1Q149M9 1564 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 PLS1Q14651 629 aa11.39□□□□□ -0.59
ZNF550-203ENST00000376230 TBC1D10BQ4KMP7 808 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms